Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00002 ATGGTGAAGGGGAGACAAGGAGAACGTGTCAGACTGTATGTAAGAGGCACAATCCTTGGGTACAAGAGGTCCAAGTCCAATCAGTACCCAAACACATCCCTGATCCAAATTGAGGGAGTGAACACCAAAGAAGAGGTAGCATCGTATGCTGGAAAGCGAATGGCCTATATCTACAAGGCCAAGGTGAAGAAGAACGGAAGCCATTATCGGTGCATCTGGGGTAAGGCTACCAGGCCACATGGTAACAGTGGTGTTGTGCGGGCAAAGTTTAAGTCCAATCTCCCACCCAGATCAATGGGAGCAAGGGTAAGAGTATTCATGTACCCTAGCAACATATA 338 0.4793 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVASYAGKRMAYIYKAKVKKNGSHYRCIWGKATRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00002 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Bva13g00002 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Bva13g00002 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Bva13g00002 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Bva13g00002 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Bva13g00002 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00002 Bva-Chr13 19571 21786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00002 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.071 1.44e-73 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00002 K02917 - nnu:104593384 224.557