Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03326 ATGGTGGTGAGGAAAGTGGGCAAGTATGAGATTGGGAGGACAATTGGCGAGGGGACCTTTGCGAAGGTTAAGTTTGCTCAGAACACCGAGACTGGTGAGAGTGTCGCCATGAAAGTACTCGACCGTAGCAGCATCATCAAGCACAAGATGGTCGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTGAGACATCCATACATTGTTCGTCTGCATGAGGTTCTAGCAAGCCgtgcaaaaatttatatcatattggAGTTCATTACAGGCGGtgaattgtttgataaaataGTACACCATGGACGTCTTAGCGAAGCTGAATCTAGAAGGCACTTCCAACAGCTTATTGATGGTGTAGACTATTGCCACACTAAAGGAGTTTATCATAGAGATTTAAAGccTGAAAATCTTCTGCTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCGTTGCCAGAACAGGGAGTTAGTATCCTGCGGACGACTTGTGGGACTCCAAACTATGTAGCTCCTGAGGTACTTAGTCACAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGAGTTACTCTTTATGTTCTAATGGCTGGATATCTTCCCTTTGATGAGCTTGATCTTACCACATTATACAACAAGATTGAGAGAGCAGAATTTACTTGCCCTGCTTGGTTTCCAGTGGGAGCAAAATCTTTAATACATAGAATGCTGGATCCAAATCCTGAAACTCGTATAACCATCGAACAGATAAGAAGTGATGAGTGGTTTCAGAAGTCATATGTTCCTGTCAGTCTTTTCGAGTATGAAGATGTAAATCTGGATGACATAGATGCAGCTTTTGATGATGCTGAGGAACAGAGGGCTGATCAGCAATGCGGGAACGAAGACACGGGTCCTTTGATGCTTAATGCATTTGACTTGATAATTCTATCTCAAGGCTTAAATCTTGCATCTCTCTTTGACCGTGGAAAGGACACTATGAAATACCAAACACGCTTTGTCTCTCAGAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAGGTTGTGGCACAATCAATGGGATTCAAGACACACATTCGCAACTACAAGATGAGAGTAGAGGGtatttcatcaaacaaaacTGGTTATTTCTCTGTAATCCTGGAAATTTTTGAGGTTGCTCCAACATTTCTAATGGTGGACATTCAGAAAGCAGTTGGAGATGCAGGTGAATACCTCAAGTTTTACAAGAATTTTGTTGGCAATCTTGAGGATATTATCTGGAAGCCGCCTCATGAATCAAGCAAATCAAGGATCTCCAAGATTAAAGGCAAAAGACGTTCCTTTCATCACCCATA 1355 0.4059 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSSIIKHKMVDQIKREISIMKLVRHPYIVRLHEVLASRAKIYIILEFITGGELFDKIVHHGRLSEAESRRHFQQLIDGVDYCHTKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVTLYVLMAGYLPFDELDLTTLYNKIERAEFTCPAWFPVGAKSLIHRMLDPNPETRITIEQIRSDEWFQKSYVPVSLFEYEDVNLDDIDAAFDDAEEQRADQQCGNEDTGPLMLNAFDLIILSQGLNLASLFDRGKDTMKYQTRFVSQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISSNKTGYFSVILEIFEVAPTFLMVDIQKAVGDAGEYLKFYKNFVGNLEDIIWKPPHESSKSRISKIKGKRRSFHHP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03326 451 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Bva12g03326 451 Pfam NAF domain 305 363 IPR004041 GO:0007165
Bva12g03326 451 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03326 451 Gene3D Transferase(Phosphotransferase) domain 1 3 305 - -
Bva12g03326 451 CDD CIPK_C 309 419 - -
Bva12g03326 451 SUPERFAMILY Protein kinase-like (PK-like) 6 274 IPR011009 -
Bva12g03326 451 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 443 - -
Bva12g03326 451 PANTHER - 2 443 - -
Bva12g03326 451 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Bva12g03326 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Bva12g03326 451 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03326 451 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03326 451 Gene3D Kinase associated domain 1, KA1 306 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03326 Bva-Chr12 24057971 24063366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03326 1 388 CBL-interacting serine-threonine protein kinases AT4G24400 82.732 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva12g03326 Pkinase 4.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03326 - - gmx:100813117 803.512