Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03319 ATGCTTCAGAGCTTGGTTCCTCGAACCTCAATCGATTCAAATCCTAACGGAAGTTCCTCAATGAAGACGACGAAGCGCGTGGAGAGGGAATTTGACAGCGGCGATGGAGATTCCCCTAGTGAGGATCCGTCGTTCAAGCGACCAAATTCTGGCCGGAATCCATCCGGCGAGGCTTCTGTTTCCGGCGAGAAGACAGTGGAGGAAAGCGAGGGACACGAGGAGCCCGTGTTTGAAGGTGAGTCCACTGGATTGAGATTGTTGGGATTGTTGCTCCAATGCGCCGAGTGTGTAGCCATGGATAATCTCGACGAAGCTAGTGATCTGTTACCGGAGATCGCCGAGCTTTCCTCACCGTTCGGGAGTTCACCGGAGCGCGTCGGCGCGTACTTTGCTCACGCGCTGCAAGCCAGAGTAGTAAGTTCATGCCTCGGTTCTTACTCACCACTCACTACTAAATCGCTGAGGATGATTCAGTCGCAGCGGATTTTCAACGCGTTCCAATGTTATAACTCGGTGAGTCCACTCGTGAAGTTCTCTCACTTCACCGCCAACCAAGCCATATTTCAAGCACTGGACGGTGAGGATCGCGTTCACATCATCGACCTCGACATAATGCAAGGACTTCAGTGGCCAGGATTGTTCCACATCCTCGCTTCACGGTCTAAAAAAATACGCTCCATGAGGATAACCGGGTTCGGGTCCTCCTCCGAGCTGCTCGAGTCGACAGGGCGGAGACTCGCCGATTTTGCGAGTTCACTCGGCATGCCCTTCGAGTTTCACCCTCTGGAGGGCAAAATCGGAAATGTGACGGACCTCAGTCAACTCGGGGTGAGACCAAACGAGGCTATAGTGGTCCATTGGATGCACCATTGCCTTTATGATATCACAGGCAGCGATTTGGGAACGTTAAGATTGTTGACTTTGTTAAGACCCAAATTGATCACAACCGTTGAACAAGATCTCAGCCACGCAGGCACTTTTCTAGCTAGATTCGTTGAGGCCCTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGATGGATTAGATACGACCAGCCTAGAAAGGCATACCGTGGAGCAGCAGCTGTTCGGCTGCGAGATCAGGAACATCGTTGCCGTTGGTGGGCCCAAGCGAACGGGTGAGGTTAAGGTAGAGAGGTGGGGTGATGAATTGAAAGGGGTCGGGTTCCGACCCGTTTCTTTACGGGGCAACCCGGCTGCCCAAGCTAGTCTATTGCTGGGGATGTTTCCTTGGAGAGGGTACACTTTGGTGGAGGAGAATGGGTGCTTAAAGTTAGGGTGGAAAGATCTTTCTCTGTTGACCGCCTCTGCCTGGCAGCCGTCTGATTA 1352 0.5281 MLQSLVPRTSIDSNPNGSSSMKTTKRVEREFDSGDGDSPSEDPSFKRPNSGRNPSGEASVSGEKTVEESEGHEEPVFEGESTGLRLLGLLLQCAECVAMDNLDEASDLLPEIAELSSPFGSSPERVGAYFAHALQARVVSSCLGSYSPLTTKSLRMIQSQRIFNAFQCYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGRRLADFASSLGMPFEFHPLEGKIGNVTDLSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITTVEQDLSHAGTFLARFVEALHYYSALFDALGDGLDTTSLERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELKGVGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03319 450 PANTHER SCARECROW-LIKE PROTEIN 23 68 447 - -
Bva12g03319 450 MobiDBLite consensus disorder prediction 23 42 - -
Bva12g03319 450 MobiDBLite consensus disorder prediction 1 79 - -
Bva12g03319 450 MobiDBLite consensus disorder prediction 43 62 - -
Bva12g03319 450 Pfam GRAS domain family 88 447 IPR005202 -
Bva12g03319 450 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 68 447 IPR005202 -
Bva12g03319 450 MobiDBLite consensus disorder prediction 63 79 - -
Bva12g03319 450 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g03319 450 ProSiteProfiles GRAS family profile. 77 447 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03319 Bva-Chr12 24023666 24025467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03319 23 450 GRAS Transcription Factor Family AT5G41920 65.127 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g03319 GRAS 9e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03319 - - zju:107404603 712.605