Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03315 ATGGAGTTTGGAGCTTCAGATGCCATTGACCTTGTGAAATGTGTGGGAAATTGGACATGGGAGCAAGCTCGTTTTTCTATGTGTTTCAACTCTTTAGTTGAAGAATTtgaccaagaaaaaaagaagttggaAGCAAACATGGATGACATgcataaaaatgttaaaaattccGTACGGAACACCATAGAAGTTGCTAGCCGTGATAAACTTGATTTGAAGAATGCAGAAGATCTCAGAAAGGAAGTGGATAAGCTGCAGGAAGAGGTTAATCTGAAGAAGGCTTGCTGTCATGGGCGTTGTCCTGACTTGTATTGGCAAGATCGTATAGGCAGACAGTTAGCAGACAAGACAGAGGACATGAAGAAGCTGAATGCTCAATTTCAACCCCAAAAGTTTTCACGCATTCAGTCACTTCCAGGCATGGAATACTACTCTTCAAAAGATTTCATTCCCTTAAGGAGTACCAAAAAGGCTTTTGATGAACTTTTGATGGCACTCAATGATCCTAACATTCGTAGGATTGGGCTGCACGGCATGGGTGGCTGCGGTAAGACAACCCTTGTAAAAGAAGTAGGGAAGGAAGCCCAGAAGCTTTTTGAGAAAGTTGTCTTTGTTACAGTGTCTAGAAACTTGGAAGTCAGAAAGATCCAAGGTAGCATTGCAGATCACCTGAACTTAACActgaaggaagaaaatgaacaagTAAGAGCGAAAAGACTGTACTTGAGATTATGTGGCagtgaaaaaattttaataatcctTGATGATGTGTGGGAAGAACTAAATTTTGAGGCCATAGGGATTCCATTTCATGAGAAGAGTGAGGGTTGTAGGATCCTCTTGACAACTCGACTTCGAGGTGTATGTGTTTCCTTAAAATGCAAAGAGGTTTCCCTAGGTCTCTTATCCGAGGAAGAAGCATGGCAGTTGTTCCAAAAACATGCAGGGATAAATGAGAATGCCTCTGAAAAATTCTTGAAGGGGTTGCCCCGAGATATTAACAAAGCTTGCAAGGGGCTGCCTATTGCCATTACAGCTTTTGCCAAAGCATTGAAGGACAAAGACTTGGATGATTGGAAGGACGTGTATGACTTGCTGAAACATTGTCAACAAGTGGATATTCAGAACAAGTCAGAAGATCCTTATGGGAGTCTTGAATTTAGCTATAATTGTCTAAAAGATAAGGAAGCTGAAGAACTCTTCTTGTTATGTTCGCTATTCCCAGAAGATTCTGAAATTAAGAAGGAAGACTTAATTAGGATGGCGATAGGATTGGGCTTATTTGGGAATGTTAACTCATGTAATAATGCAAGAAGGAAAGGTCGGTGGGCCATTGGGAAACTTCTAGACTCTTTTCTGTTGCTTAAAGCTAAAGATGGCATGTCTGTAATGCTGCATGATATACTTCGTGCAGTGGCCTTGAGGATAGCAGTCAACAAGATTCAAACAATTTTGGAGCCAACAGGGCGTCATAGTTTGATGAAATTGCCAGAGCATGTGGCTCCTGAAGAAATAACCAAATTATATTGCTATAATATCAATGAATTTCCCCTCCAGTTCGAATGTCCTAATCTAGAGATCTTGATCGTGTGTAAAGATGCCAAAGGTTCACCAAAACTACCCAATGAGTTTTTCAAGGAGATGAGAGGTCTTAAAGTTTTGACTATAATGGACAAATCTTCATGGCAAAAGTCAACTTTGATGTTGCCTGAGTCAATTTGGTCCTTAAAACTCTTGAGAACTCTATGCATAAGAGGCTGTAGATTAGACTCCAATTTTTCACTTGAACAACTGAAACATCTTgagattcttgaattttgtAATTGCTCCATTATGCAACTTCCAAATGACATAGCGGAGTTAGAAAAGTTGAAATTGCTTGATGTTTCAAGGTGCAGAGTAAGAGGCAACCCTTACAAGGTGCTAGGACACTGTGAAGAACTCGAAGAGCTGCATTTTTCAGAAATTGAACTTGATAGGGAGGAGTTAAAGGATCAAAATCTTGCTGAATTCTTTGAAAAGAATGACTTGAGCAAACTGGAAAGGTACAATGTGCAAATTGGAGCTCGTgtagagaaattgaaagaTGATCCAAAATCAAGATTCTTATCAATAAGTCCTTATTCTGATCAAGATAAATCCACCTCAACTACAACAATTAAAGCTCTAGCACAAAATGCTGAGGTTCTCTTTCTAGAGAATATTCCAAAAAGTGTTGAAAATGTCATCCCAGACATAGTTTTCCAAGAAGGAGTATGCTTGAAAGATTTAATTGAGCTTCTAATTTGTAATTCTGAAGGGATAAAGTACCTGATTGACACCACACAGCAATTGAATCAAAACACAACAGTTTTGTCCAACCTGCTTAAGCTAAGAATCACAGGGATGAAGTGCATGGAAGGTTTCTGCAAAGGTGAACCTACATGTGGCCTTTTTGAGCAATTAAAGGAACTGGAATGTAGTCAACTGCCAGTTTTATCATCCTTAGGGAATCCAAAGCTGTGCAATCTTGTCATTCTTAAATTGGACAGTTGTCCAAAGCTGGAATCTCTCTTCACACCTGCTGTTGCTGTAAGTCTATCACTGTTGGAGGAGCTAAAAGTAACCAAATGCCATGGATTGATATACATAATAGGAGATGATAAGGAGGAGGACATTACAGATGGTAATGATCAGAGGACTTACAAATCAGTGTTCAAAAAACTGAAAGAGCTTGTTGTGGGAGATTGTTCAAAGCTCGAATACCTAATCCCACTTTCTTTTGCTTGGGGCCTTGAAAATTTggagattttgaaaatatatttagctCCTAATTTGAAATATGGGTTTGGCAAATACAGTCGTCCTCAACAATCAAGCTATCAGAATCAAAACGTGACTCATATCATCGACCTTCCAGTTCTAAAAGTACTCGAGCTCCTTAATTTGGAAGAGATAATTAGCATTTGCtcaaaaaattacaatgtaAAGTTTCCACACTTGCTTGAGTCTCACATAGTGGATAAATGTCCAAATTTGTACCCTATCATATCTACCAATGCTCCCATGGTTGATTCGGATATAGAAGTACAAGTACAGCTAGAAGGTGAACCGCCCAGAAAGGCCAAGTTATCTTTTATGCCATCGGGTACCTCTATCGTTGcaaagaatataaaagaatgGGTATTTGCTCCAATACTACGTCAAGCTCGTTATTCTTTAAGCTTCAACACATATGTCAAAGATCTTCAATCAGAAACAGAGATATTGAAGTTTACAACAGCAAGTTTGCGGGACCGTGCGGAAGGAGAAACTCTAGAGCTTGATAGCCGTGTTCAAGAGTGGCTAGTTAATGCAGGTACTCTCATTAAAGAAGCAGAGAAACTGGAACAAAAGGCAATTGAATACCGAAGCTGTTGTTTTGGGCACTTTCCCAATTGGATTCAGCAATATCGTATAGGCAAGCAGGCAGAAAGAAAGATCAATGCCATAGTAAAACATAATCAAAGTCGGGAATtccaaaaattttctcaacGAGCATCACTACCATGCATGGATGAttattttaaggaaaattttatattgttcaaCAGTAGAAAAACCATTTATTATTCTGTTTTGGAGTTACTAAAGGAGAATGAGATTTCCATTATTGGATTGCATGGCACGGGGGGTTGTGGTAAAACCACCTTGGCAAAACTAATGGCTAAAGAAGCAGAGCAGCTTTTTGACAAGGTAATCTTTGTTGATGTGTCCTCAAATCGTGATGTTCGAAAGATCCAAGAGAAAATTGCAAGAACATTAAATTGGAAACTACTGGAAGCATCCGAATCAGTAAGAGccaaaaatttgtttatgaGATTATCAACTGGAGAAAGGGTTCTTATAATTCTGGATAATGCACGGGATAGACTCAATCTTGAAGACATAGGGATTCCATATGGTGTCAATCACAAGGGTTGCAGCATTCTCATAATTACACGGAGTAAACAAGTATGCATTATGATGGATTGTCGAAGGATGTTTTCTTTGCTGCCCTTAAGTGAAGAAGAAGCATGGTTTCTGTTACAAAGACATGCACGCATCAGGGAAGATACCAATGATTCCTTGAAGGATGTCTCAAAAGAGGTCGCACGAGAATGTGGAGGATTACCTATTGCTATTGTAGCCTTGGCTAGCACTTTGAAGGGGAAAACTGAAGATGACTGGAAGGAAGCCTTGACAATGTTGCGAAGTCCAACAGACAATGAAGCAGATTTGGGAAGTACTTATAAATGTCTTCAGGTTAGCTATCATAATTTGGCAGATGAAAATGCCAAGTCACTCTTCTTACTATGTTCTATATTCCCggaagattttgaaatatatgaaGAACATTTGATGAGATATGGGATAGTTCTAGGtctatttggagaagtttcctCTTATGAAAGAGGAAGGGATAAGGTGAGAGAAGCTAAAGAAAAACTCATAGATTCTTGTTTGTTATTCAAAGAAGATAAAGGGCAATGGGTCAAAATGCATAGTTTATTTCGTGATATAGCCCTATCAATAGCAAATAAAGAGATTGTGACACTGGAAGGAACTCATGAATGGCAGTTAGGAAATACTATAAGATATTTGTGGTGTGAAAACGTTGGCAAACTTCCAAATCAGTTCTACTTTCCTAAACTTGAGTTTTTGCATCTCggtgttttaaataatttaatgctGCCAGATGAATTTTTCAATGGAATGAAATGTTTGAGAGTTTTGGTCCTTCGTTGCAATTCATACTTTCCGAAGCAAAATTCATACTTTTCGAAGCAAAATCTAAAGATAATTCTTTCTCTACCAAATCTTGTGGGTCTTTTCCTAGAAGGATGGGAACTAGGTGACATCTCTTTTATGGTGAGATTGAATAAGCTTGAGGCTCTTGTGTTGAGGAGGTGTTCATTCCAAGAAATACCAAGTGAGATTACAGAGCTAAGAAAGTTGCGATTGTTGGAATTGTCTAACTGCAGGATTGAAAGGAATTCTTATGAAGCAATTGGAAGATGTTCACAACTTCAAGAATTGTACTTTATAGGGAATTCTTGTTCAAAATGGAATTATCAACGTGAAAATGGTGTTGCATtctttcaagaaaaagaaatcgcCCTAAGATTGGAGAGATATTGTGTAGAAATAGGCAGAACTTTTGGAGTATTATACAAAGGTGATTTTTCGACATCAAGAAgtttatatattgaatattttgatgcTTCCTCCTCAAATGCAACCATTAAGAATTTGGTACAAAGAGCAGAGGTGTTATCTCTTGGAAAAATTTCTGGAGGTTGTGAAAATATCATCCCAGACATGGTTCAAAAAATAGGAGAAGGTATGAATGGATTGATTGAGCTTCAGCTCAAGAATTCAGATGAGATAAAATGCATCACTGGTAGTATCGGTCATGTTGGGGCTTTCTTCCCCTGCTTGACTAAGCTTGACGTTAATAGCTTAAAGCATATGGAAGCTTTGTGCATTGGCCCAATTCCAGCTGGCTCCTTTCAGAAATTAAAGAAGCTGCAATTGTACAATTGTCCATTGTTAGAATCTCTCTTCACTGTAGCTGTTGCTCAAAGTCTGGAAATGCTGGAAATTATGAGTATAACCAAATGTGATAGACTGAAGCATGTAATATGGGATGCAGATGCAGATACAGAAGCAAAGCAGgaaataattacaattgatgatgatgatcaaAAGAGTATATCAGCATTCCCAAAATTAGAAGTGCTCAGAGTCCAATATTGCCGCAACATAGAATACTTGGGAGGGCACTGGTTACTAAATTTTGGCAGTTTAAAAGTATTGAACGTAGGATATTGTTCAAGTTTAAAATCATTGTTGACAGCATCAACTGCTAAAACAATGACGACATTGGAAGAATTAGACATAAAATGTTGTTCCTCCTTGACGGAAGTCTTTGGAGCCCCATATGGTGAAGGTGGACAGGCACTTACACTCACAAGGCTCAAAATGTTAAGGATCACAAAACTACCAAACCTCATTGAAGTTTCCCGTGGGTTTAAGTTGCAGCATGTAATTAATGTTGAAGTAGATAACTGTCCAAAGTTCCACGGACCAGTCGTTGGCTTTCAGAATTTGTCACAAGGCCAAAACCCAGGTGAGAGAAAGATTAGAATTCGAGGATTACATGGCATGGAATCTTTATGCTGTGGTCCAACTCCAGCTAATTCGTTTGAGAAATTGAAGGAGCTGGAACTATGCGAGTGTCCATCGTTGAAGTCTCTTCTGACAGTAGCTGTTACTCAAAGTCTGGAAATGCTgcaaattttgagaataattaAATGTGAAAGATTCGAGCATTTAATATGTGATGTAGATGCAAATGCAGATAGAgatgcagagaaagaaataattacaattgatAATGATCAGAAGAGTACATCAGCTTTCTCAAAATTAGAAGTGCTCAACATCAGTTATTGCAAAAACCTGGAATACTTGGGAGGACACTGGTTACTCAATCTCTCCAGTCTAAAAGTGCTGAAAGTAATATCTTGTTCAAGCTTGAAATCAATGTTTACCCCATCAACTGCTAAAACCATGACATCATTGGAAGAATTGAGCATACTAGAATGTCCTTCCTTGAAGGAAGTCTTTGGAGTCCCTAATGATGAAGATGGTCAGGCACTTATTCTCCCAAGGCTCAAAATGTTCAGGTTTACTAAACTGCCAAACCTCATTGAAGTTTCTCGTGGGTTCAAGTTGCAGCATGTAATTAATGCTGAAGTATATGATTGTCCACTGTTTGGGGTACGATTTGATGGTTTTCGAGATATGTCACAAGCCCAAAACGCAGATGAGATAAAATACATCGCTGACTCTACCATTCAAGTTGGAGCTTTCTTCCCGGCTTG 6887 0.3678 MEFGASDAIDLVKCVGNWTWEQARFSMCFNSLVEEFDQEKKKLEANMDDMHKNVKNSVRNTIEVASRDKLDLKNAEDLRKEVDKLQEEVNLKKACCHGRCPDLYWQDRIGRQLADKTEDMKKLNAQFQPQKFSRIQSLPGMEYYSSKDFIPLRSTKKAFDELLMALNDPNIRRIGLHGMGGCGKTTLVKEVGKEAQKLFEKVVFVTVSRNLEVRKIQGSIADHLNLTLKEENEQVRAKRLYLRLCGSEKILIILDDVWEELNFEAIGIPFHEKSEGCRILLTTRLRGVCVSLKCKEVSLGLLSEEEAWQLFQKHAGINENASEKFLKGLPRDINKACKGLPIAITAFAKALKDKDLDDWKDVYDLLKHCQQVDIQNKSEDPYGSLEFSYNCLKDKEAEELFLLCSLFPEDSEIKKEDLIRMAIGLGLFGNVNSCNNARRKGRWAIGKLLDSFLLLKAKDGMSVMLHDILRAVALRIAVNKIQTILEPTGRHSLMKLPEHVAPEEITKLYCYNINEFPLQFECPNLEILIVCKDAKGSPKLPNEFFKEMRGLKVLTIMDKSSWQKSTLMLPESIWSLKLLRTLCIRGCRLDSNFSLEQLKHLEILEFCNCSIMQLPNDIAELEKLKLLDVSRCRVRGNPYKVLGHCEELEELHFSEIELDREELKDQNLAEFFEKNDLSKLERYNVQIGARVEKLKDDPKSRFLSISPYSDQDKSTSTTTIKALAQNAEVLFLENIPKSVENVIPDIVFQEGVCLKDLIELLICNSEGIKYLIDTTQQLNQNTTVLSNLLKLRITGMKCMEGFCKGEPTCGLFEQLKELECSQLPVLSSLGNPKLCNLVILKLDSCPKLESLFTPAVAVSLSLLEELKVTKCHGLIYIIGDDKEEDITDGNDQRTYKSVFKKLKELVVGDCSKLEYLIPLSFAWGLENLEILKIYLAPNLKYGFGKYSRPQQSSYQNQNVTHIIDLPVLKVLELLNLEEIISICSKNYNVKFPHLLESHIVDKCPNLYPIISTNAPMVDSDIEVQVQLEGEPPRKAKLSFMPSGTSIVAKNIKEWVFAPILRQARYSLSFNTYVKDLQSETEILKFTTASLRDRAEGETLELDSRVQEWLVNAGTLIKEAEKLEQKAIEYRSCCFGHFPNWIQQYRIGKQAERKINAIVKHNQSREFQKFSQRASLPCMDDYFKENFILFNSRKTIYYSVLELLKENEISIIGLHGTGGCGKTTLAKLMAKEAEQLFDKVIFVDVSSNRDVRKIQEKIARTLNWKLLEASESVRAKNLFMRLSTGERVLIILDNARDRLNLEDIGIPYGVNHKGCSILIITRSKQVCIMMDCRRMFSLLPLSEEEAWFLLQRHARIREDTNDSLKDVSKEVARECGGLPIAIVALASTLKGKTEDDWKEALTMLRSPTDNEADLGSTYKCLQVSYHNLADENAKSLFLLCSIFPEDFEIYEEHLMRYGIVLGLFGEVSSYERGRDKVREAKEKLIDSCLLFKEDKGQWVKMHSLFRDIALSIANKEIVTLEGTHEWQLGNTIRYLWCENVGKLPNQFYFPKLEFLHLGVLNNLMLPDEFFNGMKCLRVLVLRCNSYFPKQNSYFSKQNLKIILSLPNLVGLFLEGWELGDISFMVRLNKLEALVLRRCSFQEIPSEITELRKLRLLELSNCRIERNSYEAIGRCSQLQELYFIGNSCSKWNYQRENGVAFFQEKEIALRLERYCVEIGRTFGVLYKGDFSTSRSLYIEYFDASSSNATIKNLVQRAEVLSLGKISGGCENIIPDMVQKIGEGMNGLIELQLKNSDEIKCITGSIGHVGAFFPCLTKLDVNSLKHMEALCIGPIPAGSFQKLKKLQLYNCPLLESLFTVAVAQSLEMLEIMSITKCDRLKHVIWDADADTEAKQEIITIDDDDQKSISAFPKLEVLRVQYCRNIEYLGGHWLLNFGSLKVLNVGYCSSLKSLLTASTAKTMTTLEELDIKCCSSLTEVFGAPYGEGGQALTLTRLKMLRITKLPNLIEVSRGFKLQHVINVEVDNCPKFHGPVVGFQNLSQGQNPGERKIRIRGLHGMESLCCGPTPANSFEKLKELELCECPSLKSLLTVAVTQSLEMLQILRIIKCERFEHLICDVDANADRDAEKEIITIDNDQKSTSAFSKLEVLNISYCKNLEYLGGHWLLNLSSLKVLKVISCSSLKSMFTPSTAKTMTSLEELSILECPSLKEVFGVPNDEDGQALILPRLKMFRFTKLPNLIEVSRGFKLQHVINAEVYDCPLFGVRFDGFRDMSQAQNADEIKYIADSTIQVGAFFPA 2295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03315 2295 SUPERFAMILY L domain-like 1905 2262 - -
Bva12g03315 2295 CDD AAA 157 283 - -
Bva12g03315 2295 SUPERFAMILY L domain-like 1499 2027 - -
Bva12g03315 2295 Coils Coil 68 95 - -
Bva12g03315 2295 Gene3D Ribonuclease Inhibitor 1891 1981 IPR032675 -
Bva12g03315 2295 Gene3D Ribonuclease Inhibitor 832 945 IPR032675 -
Bva12g03315 2295 Gene3D Ribonuclease Inhibitor 2127 2215 IPR032675 -
Bva12g03315 2295 Gene3D Ribonuclease Inhibitor 1726 1889 IPR032675 -
Bva12g03315 2295 PANTHER - 828 903 - -
Bva12g03315 2295 SUPERFAMILY L domain-like 503 873 - -
Bva12g03315 2295 Pfam NB-ARC domain 1201 1425 IPR002182 GO:0043531
Bva12g03315 2295 Pfam NB-ARC domain 160 380 IPR002182 GO:0043531
Bva12g03315 2295 PANTHER - 899 1014 - -
Bva12g03315 2295 PANTHER - 2067 2149 - -
Bva12g03315 2295 PANTHER - 2162 2237 - -
Bva12g03315 2295 Gene3D Ribonuclease Inhibitor 1507 1709 IPR032675 -
Bva12g03315 2295 PRINTS Disease resistance protein signature 337 351 - -
Bva12g03315 2295 PRINTS Disease resistance protein signature 244 258 - -
Bva12g03315 2295 PRINTS Disease resistance protein signature 619 635 - -
Bva12g03315 2295 PRINTS Disease resistance protein signature 173 188 - -
Bva12g03315 2295 Gene3D - 142 298 IPR027417 -
Bva12g03315 2295 SMART AAA_5 1207 1340 IPR003593 -
Bva12g03315 2295 SMART AAA_5 170 305 IPR003593 -
Bva12g03315 2295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 404 IPR027417 -
Bva12g03315 2295 PANTHER RPP4C3 828 903 - -
Bva12g03315 2295 PANTHER RPP4C3 1057 1803 - -
Bva12g03315 2295 PANTHER RPP4C3 1836 1915 - -
Bva12g03315 2295 Gene3D Ribonuclease Inhibitor 490 735 IPR032675 -
Bva12g03315 2295 PANTHER - 1928 2005 - -
Bva12g03315 2295 PANTHER - 23 791 - -
Bva12g03315 2295 Gene3D - 1179 1334 IPR027417 -
Bva12g03315 2295 PANTHER RPP4C3 2162 2237 - -
Bva12g03315 2295 Coils Coil 1105 1125 - -
Bva12g03315 2295 PANTHER - 1057 1803 - -
Bva12g03315 2295 PANTHER - 1836 1915 - -
Bva12g03315 2295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1177 1439 IPR027417 -
Bva12g03315 2295 Gene3D - 301 386 IPR042197 -
Bva12g03315 2295 Gene3D - 1339 1428 IPR042197 -
Bva12g03315 2295 PANTHER RPP4C3 1928 2005 - -
Bva12g03315 2295 PANTHER RPP4C3 23 791 - -
Bva12g03315 2295 PANTHER RPP4C3 899 1014 - -
Bva12g03315 2295 PANTHER RPP4C3 2067 2149 - -
Bva12g03315 2295 Coils Coil 33 60 - -
Bva12g03315 2295 CDD AAA 1192 1320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03315 Bva-Chr12 23969614 23979491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03315 170 431 WRKY Transcription Factor Family AT5G45050 23.396 7.26e-07 53.1