Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03311 ATGGAGTTAAGAGTTTCCTCAAccttattctttcttctccttttagCCTTTCCTTTCCAATTTTCATCCTCATCTTCTACCAAGGGCTTCTCACTCTCTGTGGAGAACCCAGATGATGTTATTCTTTCACCAAATGGCATATTCACTGCTGGGTTTTATGCTGTTGGTGAAAATGCCTATTGCTTTTCCATTTGGTTCACAGAACCTAAAGCCCAAAACCTCACTGTCGTTTGGATGGCAAACCTTAACCAACCTGTGAATGGAAGACTCTCAACACTTTCCATAGATGAAACGGGTAATCTTATCTTAACCGATGCCCGGCAATTCAAGATTTGGACCACTGACACTTCCTCATCCTCCTTGTTAAAATTGGTTCTCAACAATAATGGTAATCTTGTTTTGCATGAGAAGCAAGGTACCGTTTTGTGGCAAAGCTTTGATCACCCAATTAATACACTTCTTCCTGGTCAAGTTCTCCCCAAAGATGCATCACTTGTCTCTTCAAGAAGTGAAACTAACCATTCCTCAGGTTTCTATAAGCTGTTCTTCGACGATTTTAATGTCCTTCGTCTTGCTTTTGATGGCCAAGATGTCCCAAGTAACTACTGGCCAGATCCTTGgctaaaaaattttgaatctggAAGGTCCTCATATAATGGAAGTAGAAATGTAGTTCTTGATGCCTTGGGTTATTTCAGTTCATCTGACAACTTTACTTTCAAGACATCAGATTATGGCAGAGTGCTCCAAAGAAGGCTAATGATTGATTATGATGGTAATCTGCGAGTTTATAGTAGAGAAAGTGCAGCAGATTATTGGTATGTTTCATGGCAAGCCAAATCAGAACCTTGCAAGATTCATGGCATCTGTGGACCAAACAGCATGTGCAGCAATGATCCTTATTCAGGTAGGAAATGCTCTTGTCTGCCTGGTTATAAGGTTAAAAATGAGAGTGATTGGTCTTATGGGTGTGAagcaaaattcaatatttcttGCAACATGAATGAGTCTCGCTTTCAACTCATAAGTCATGTGGAGTTCTATGGCACTGACTTTGTTTACCTCCAAAATTCAACCTTCAAACAATGTCAAGAAATATGCTTGCAGTTATGTAATTGCAAAGGCTTTCagtataattttagaaaagaatttaACCGTTATGATTGTTACACAAAGACAATGTTGGTCAATGGTTATCAATCCCCTGATTTTTTTGGAGCAATGTTCTTAAGATTGCCTAAAGGCGATTCATTCTCTGGTGATCTCAAAGAATCTGTCAATAGTTGTCATAATAATGTCAATTCTGTGATGCTAGAGAGAGGCTATATTGAAAGACGAGAGAACACTTTGGTGAAGATCTTCTTATGGCTAGCTTATGCAATTGGAGGGATAGAGATTTTTTGTCTCTTCATGGTTTGGTCTTGCTTGATGATAACTGGGAAAAAGTCTAGTGTAAATGAACAAGGATACCAGCTCAATGCAATTGGATTCAGAAGATTCAGTTACTCTGAGTTGAAAAAGGCAACAAATGGATTCTGCGAAGAGATCGGAAGGGGAGGTGGGGGAATTGTTTATAAGGCTGTATTATCAGATAATCGAGTTGCAGCCGTAAAGAGACTTAGCGAAGCTAACCAAGGAGAGAGTGAGTTCCTAGCGGAGGTAAGCATCATTGGAAGACTCAACCACATGAACTTGATTGAGATGTGGGGATATTGTGTAGAGCGTAAGCATCGGCTATTAGTGTATGAGTATATGGAGAATGGGTCTTTGGCCCAAAATCTCATGTCAAATACACTTAATTGGAGTGAAAGGTATAACATTGCTTTGGGCATTGCTAGAGGCCTATCATATCTACACGAAGAATGTTTGGAGTGGATTTTACATTGTGATGTAAAACCTCACAATATACtattagatttaaattatCATCCCAAGATAGCAGATTTCGGATTGTCTAAACTACAAAATAGAAATGACATTAACTCAAGCTTCTCAAGGGTTCGAGGAACTAGAGGCTATATGGCTCCGGAATGGATTTTCAACTTGCCAATCACTTCAAAAGTAGATGTTTATAGCTATGGAATCGTTATGCTGGAGATGATAACAGGAAAGAACCCATCAATGGGCATCCAAGTTGCTGATGGAGCAGAAGCACATCAAGGTCGATTACGGAGACTAGTAACATGggtgagagagaagaagatcAAAGGATTAGAAATGACATCTTGGGTGGAGGAAATCATGGACCCTTTGGTTGAAGGAGATTACGACATAAAGAAGATGGAGACTTTGGTTAAAGTGTCTTTAGAATGTGTGCAGGAAGAAAAGAGTGCAAGACCCACCATGAGTCAAGTAGTTGAAATGCTTCAAAGATATTG 2378 0.3797 MELRVSSTLFFLLLLAFPFQFSSSSSTKGFSLSVENPDDVILSPNGIFTAGFYAVGENAYCFSIWFTEPKAQNLTVVWMANLNQPVNGRLSTLSIDETGNLILTDARQFKIWTTDTSSSSLLKLVLNNNGNLVLHEKQGTVLWQSFDHPINTLLPGQVLPKDASLVSSRSETNHSSGFYKLFFDDFNVLRLAFDGQDVPSNYWPDPWLKNFESGRSSYNGSRNVVLDALGYFSSSDNFTFKTSDYGRVLQRRLMIDYDGNLRVYSRESAADYWYVSWQAKSEPCKIHGICGPNSMCSNDPYSGRKCSCLPGYKVKNESDWSYGCEAKFNISCNMNESRFQLISHVEFYGTDFVYLQNSTFKQCQEICLQLCNCKGFQYNFRKEFNRYDCYTKTMLVNGYQSPDFFGAMFLRLPKGDSFSGDLKESVNSCHNNVNSVMLERGYIERRENTLVKIFLWLAYAIGGIEIFCLFMVWSCLMITGKKSSVNEQGYQLNAIGFRRFSYSELKKATNGFCEEIGRGGGGIVYKAVLSDNRVAAVKRLSEANQGESEFLAEVSIIGRLNHMNLIEMWGYCVERKHRLLVYEYMENGSLAQNLMSNTLNWSERYNIALGIARGLSYLHEECLEWILHCDVKPHNILLDLNYHPKIADFGLSKLQNRNDINSSFSRVRGTRGYMAPEWIFNLPITSKVDVYSYGIVMLEMITGKNPSMGIQVADGAEAHQGRLRRLVTWVREKKIKGLEMTSWVEEIMDPLVEGDYDIKKMETLVKVSLECVQEEKSARPTMSQVVEMLQRY 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03311 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 166 IPR036426 -
Bva12g03311 792 CDD STKc_IRAK 523 791 - -
Bva12g03311 792 Pfam S-locus glycoprotein domain 235 315 IPR000858 GO:0048544
Bva12g03311 792 SMART serkin_6 510 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03311 792 CDD PAN_AP_plant 328 413 - -
Bva12g03311 792 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Bva12g03311 792 ProSiteProfiles Protein kinase domain profile. 510 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03311 792 PANTHER OS07G0415500 PROTEIN 7 791 - -
Bva12g03311 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Bva12g03311 792 Pfam Protein kinase domain 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03311 792 Gene3D - 30 147 IPR036426 -
Bva12g03311 792 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Bva12g03311 792 SUPERFAMILY Protein kinase-like (PK-like) 486 789 IPR011009 -
Bva12g03311 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Bva12g03311 792 Gene3D Transferase(Phosphotransferase) domain 1 585 792 - -
Bva12g03311 792 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Bva12g03311 792 ProSiteProfiles PAN/Apple domain profile. 332 409 IPR003609 -
Bva12g03311 792 Pfam D-mannose binding lectin 75 162 IPR001480 -
Bva12g03311 792 Gene3D Phosphorylase Kinase; domain 1 476 584 - -
Bva12g03311 792 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 7 791 - -
Bva12g03311 792 CDD B_lectin 41 149 IPR001480 -
Bva12g03311 792 SMART blect_4 32 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03311 Bva-Chr12 23929433 23932002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03311 500 789 Trihelix Transcription Factor Family AT5G38560 42.761 3.85e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva12g03311 Pkinase 3.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03311 - - jre:108987254 956.822