Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03306 ATGACAGTCTCCCATCTCGAACCATCTGTGCCCGACCTGCAGACACTTAAGAGGACAAATGCAATTGTAGGCTGCAATAGGAGGTCCTTCATGTGTGATTATTTGACTAATAAACAGGGATTTAAGCCTGAGAACATCAAGAGATTTGACTCCCTTGATGAATACCCAAGGTCATTAGAGAACAATGAAATCAAAGCAGCTATTTTAATTGCACCACAGGCTGAAATCTTCCTTGCTACCTATTGTAAGGGCTACATCACAGCAGGAACCCCATTGACGCTTGTTGGTCTGGGCTTTGTTTTCCCAAGAGGTTCAAGATTGGCAGTAGACATGTCAGAAGCTGTACTGGAATCAATAGAAAGAGGAGAAGTGCAggatttgaagaagaaaatgctaTCCACCACAAATTGCAGGTCATCTGATGATGCGGAACAAGATGAAAAACTAGGTCCCCAACCTTTCTTTGGCCTATTCTACATTTCTGGCACCATAGCAAGCTTGGGTTTAGTATTCACTATGGTGCATTTTGCTGGAAGAAATGTAAAAACATCCAAGACATGGCAACGAATCAGAAGCATGAAACGTTCACTTATCCCTGAAAGAAATAGACAAGGCGAGACATTTACTAATGAGTTGTTAGGAATATGCTTCAGGACTGAAACATGTCCACGTGctgcatatatttttta 689 0.4006 MTVSHLEPSVPDLQTLKRTNAIVGCNRRSFMCDYLTNKQGFKPENIKRFDSLDEYPRSLENNEIKAAILIAPQAEIFLATYCKGYITAGTPLTLVGLGFVFPRGSRLAVDMSEAVLESIERGEVQDLKKKMLSTTNCRSSDDAEQDEKLGPQPFFGLFYISGTIASLGLVFTMVHFAGRNVKTSKTWQRIRSMKRSLIPERNRQGETFTNELLGICFRTETCPRAAYIF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03306 229 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 203 - -
Bva12g03306 229 PANTHER GLUTAMATE RECEPTOR 1 203 - -
Bva12g03306 229 Gene3D - 96 130 - -
Bva12g03306 229 SUPERFAMILY Periplasmic binding protein-like II 7 131 - -
Bva12g03306 229 Gene3D - 11 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03306 Bva-Chr12 23885259 23886093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03306 1 176 Ion Channels AT2G17260 33.708 7.40e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03306 - - gmx:100781045 239.195