Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03273 ATGGGGGTTGGCCGTGAAGTCTCAATCTCACTTGATGGCGTGAGGGACAAGAACATGATGCAGCTGAAGAAGCTCAACGCAGCTCTTTTCCCTGTTCGTTACAATGATAAGTACTATGCTGATGCCATTGCTTCGGGAGAATTTACTAAACTAGGTTATGTTGCTAACATGTGGTTGAACATTCTTTCATTTGGACATATGTTGCAAAATTTGcTTACTACAGTGACATATGTGTTGGTGCTATCGCGTGCCGGCTTGAGAGAAGGAAAATCGGGGAGTCCGTGTTTATATCATGACATTAGGCGTTTTACCACCTTATCGCGGGCTTGGTATTGCCTCCCTGGTGACTATGGATTTGACCCACTTGGTCTTTCAGACCCTGAAGGAACAGGAGGCTTCATTGAGCCAAAATGGTTGGCATACGGTGAGATCATCAATGGCCGTTTCGCAATGCTGGGTGCAGCCGGTGCCATCGCACCAGAGATTCTGGGAAAAGCTGGTCTAATTCCAGAGGAAACAACTCTTCCATGGTTCAAAACTGGTAAGATTCCAAGACTGGATCCATGGGGAAGCAATACTTTCTGGGGCTTGAGAAGGGTTTGGGAGGCTCCGGCTTACCCGGGAGGACCTTTCTTCAACGCTCTTGGATTTGGGAAAGATGAGAAATCATTGAAGGATCTGAAGCAGAAGGAAGTGAAGAATGGAAGATTGGCCATGTTGGCAATCTTGGGTTACTTTGTACAAGCTGTTGTTACTGGAGTTGGTCCCTATCAAAACTTGCTGGACCATTTGGCTGATCCTGTGCACAACAATGTCTTGACCAGCCTCCAGTTTCATTA 839 0.4648 MGVGREVSISLDGVRDKNMMQLKKLNAALFPVRYNDKYYADAIASGEFTKLGYVANMWLNILSFGHMLQNLLTTVTYVLVLSRAGLREGKSGSPCLYHDIRRFTTLSRAWYCLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETTLPWFKTGKIPRLDPWGSNTFWGLRRVWEAPAYPGGPFFNALGFGKDEKSLKDLKQKEVKNGRLAMLAILGYFVQAVVTGVGPYQNLLDHLADPVHNNVLTSLQFH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03273 279 Gene3D Chlorophyll a/b binding protein domain 105 278 - -
Bva12g03273 279 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 201 278 - -
Bva12g03273 279 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 106 195 - -
Bva12g03273 279 Gene3D - 5 65 - -
Bva12g03273 279 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 201 278 IPR001344 GO:0009765|GO:0016020
Bva12g03273 279 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 106 195 IPR001344 GO:0009765|GO:0016020
Bva12g03273 279 Pfam Chlorophyll A-B binding protein 113 249 IPR022796 -
Bva12g03273 279 SUPERFAMILY Chlorophyll a-b binding protein 113 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03273 Bva-Chr12 23583005 23586114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03273 112 279 Chloroplast and Mitochondria Gene Families AT1G61520 69.268 7.93e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03273 K08909 - sind:105165532 273.863