Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03270 ATGACTGAAATTGGTGCAAGTGTTGCATCAGAGATAGTGAAGAGAGTGTTGGACACAGCAATACGCCGAGCTCGTTATTCGTTCTGCTTCAACAAGTATGTTGAAGATCTTCGAAGAGAAAAAGGATTGTTGACAAGAACAAGAGAAATCGTGAAGCAGCGTATACGAAAAAGCAGACAAGAAACTAAAAATGTTGATGATGATATCAATTGGTTGAAAGAAGCAGACTCACTCATAGAAGAAGTGCAGAAGCTGGAGGAAAAAGCAAATTCTAACAAAAGTTGTTTTGGGCACTTCCCAAGCTGCATTAGGCGATACCGTCTTAGTAAGCTGGCTGAAAAGAAGACACAAGCAGTGACAGATCTCAATCAAAAAGGCAACTCCCCAAGATTATCACGCCTTGCTACACTCCCAGGCATGAGATACTTTTCTTCTATTGAAGGATTTTTTCACTCAGAAAATACAAGAATGGCTCATGATGAACTTTTGGAGGCATTGCAAGATGATGAAGTTTTCATGGTTGGATTGTATGGAATGGGGGGATGTGGTAAAACCACATTGGCAAAACAAGTAGGTAATGAAGCAGAGAACATTTTTGATAAAGTGGCCTTTGCTATTGTGTCTAATAACGTGGATGTTCATAAGATACAAGGTGAAATTGCAAGCTACTTAGATTTGCCactaaaagaaagagaatcaaCATTGGAGAGAGCTAGGAGATTGTGGGCAAGATTAGCTAGTGGACAAAAGATTCTTATAATTCTTGATGATGTGTGGGGAAAACTTGATTTCGAAATCATAGGAATCCCCTTTCGTGAAAATCGCACAGGTTGCAAGGTTCTCCTAACTACTAGACGTTTGCAATTATGCAATGTGATGAGCTGTCAAAGAACAATTCCGCTATCACTCttaaatgaagaagaagccTGGACTCTATTTCAAAAGCATTCGGGTATAGTTGATGAGACCTCTGATTCTTTGAAGGATCTAGCAAAAGAGATTGTGAAAGAGTGTACAGGATTGCCAATTGCAATTGAAGCTGTGGCAAGCactttgaaaggaaaaagcGAAAGTGGATGGAAGGAATCATTGGAAAGACTAAAAGAAACTGCACTGATAGATGTTGAAGAAGGTCTAAGAGATCCATACACATGCTTGCAACGGAGTTATGATAATCTCAAAGATGAAGAAGCTAAGTCAATATTCTTGTTGTGCTCTATATTTCCAAAAGATTGTGAAATTCATGAAGAATATTTAGCTAGGTATGGGATTGGGCTAGGCCTATTTGGTGAAGTTAGCTCTTACGCAAGAGCTAGAAATAAGGTTCTTGAagctaaaaataaacttatagatttttgtttgttgctgaaaggtaataaaaaaaattatgtgaaaatgCATAATGTAGTTCGTGCCATGGCCTTGTCTGtggcaaagaaagaaaagaaggtgATAATGGAAATAGAAAGCAGTGGGAGGAACATaacatggaaagaaaatattacaataaaatatttgtggtACTTTAACATTCAAGAAAGTGATAGACTATCGTATTTGTTAAGTTGTCCAAAACTTGAGTTCTTGTgtgtgattttaaaaaatccaattttaGATGATGGAGTTTTCAAAACGATGAAAGATCTTAGAGTTTTGCTTTTTCAACATAAAGAAGGCCTATCAAGGGGAATTCTATCAGGCGCAAAATCAATTCAATCGCTGACAAATCTTCGTTCTCTTTTCCTAGAAGGATGGAACCTAGGTTACATATCTTTTATAGGAAGCCTTGAGAGACTTGAATCTCTTGTCTTGTGGTCTTGCTCATTTGTGGAATTGCCAGACAAAATTACAGAGCTACCAAAGTTAAAATTGTTGGATTTGTGGTATTGTGTAATTAAAAGGAATCCTGGTGAAGTGATTAGAAGATGCTCTCAACTAgaagaattatattttcttcgtAATAGTGGATGgaaggaagaaggagaaataGCTGTTGTTGCTACCTCAGCTTTGCATAGGTATCGCATAGATTTAGGAGGATGTTATCAATCTGGGGAAGAAGACTTTTCTATCTCAAGAGGCTTATGGATGAAAAATTTGGATGCTTTCACCACCAATGCAACAATTAAGGATTTGGCACAAAGAGCAGAATTTCTTGAAATACGAGAAATAGTGAACAGTGGTGGTAAGAATATTATCCCAGTTTATACCGAGAAAAAGAGTATTACCCCAAATTACACGAAAAAAAAGAGCATTATCCCAGATTataccataaaaaagaatattatccCAGACATGGTTGATGCAAAAGGAGGAGGTATGAATGAGCTAACAGAACTTCACCTTTGGAATTTTGATAAGATAGAGTGCTTTGCTGACACTAGTGATCCTTTGATGACTGAAAATGTCTTCTCCAACTTGGTTAAGCTTCATATCTCGCAACTAAAGGGTTTGAAAACTTTGTGCCATGGTCCACATGTAGGGAGCTTGAAGCTGTTTTGCAGTCTGAAGGTATTGTCACTCAGCTATTGTCCTATGATGACGTCTGTCTTCACGCGTGTTGTTGCTCAAAGTCTGGTAGTGTTGGAAGAACTGGAAATAAAAGACTGTGATGGACTAAAGCACATAGTAAGAGATGAAGAGAAGGATAATAATGAAAAGCATTACAATTTAATGTTCCCAAAATTGCGGAGGCTTTCTATCTCTGACTGCTATAAACTGGAATACTTATTTCCAGTCTCTTTTAATGAGAGCCTTGTACAATTAGAAAGTTTGACAATACAGTATGCTCCAAAATTGATATACGTGTTTGATCAATCATCAATCAATCATGAAGAACACAATCAGAAAAGGTTGCCGACCATCAATCTCCCTTCTCTTAAGACAATCGTGCTTTATAATTTGTCAAATATAAAAGCTATTTGCCCGGAAAAGTATGGTCTTTCATTGCCATACTTGAAAGAATTGCAATGGGGCTCTTGTCCAGTGTTAATGGTGGAGTCTATTAGTAAATGTGTTGATGGCGGTTCAAGAGTGATCACACCCATGGCCATACAGaataagaaagagaatgCCAAGGAGAATCATAAAAGATTCCCTGAACCAGAAAAATCGATGGAACCTTCAAATAATAGGGTTTCTGAAGCTTTAGACTCAGAGAAATTGGAAAATGCTGGCAGGACTTCACCAATATCCCAATCTTTATTTTCCATGGCTATTGCTGCAGAGGAAAGAGACAATATAAAGAAGATGGAGGAGAAGAATATAACTGAGCAAAGTACTATGTCTAAAAGCTACCCAGAAAGTGCTGAAGCTCACGAAACACTGGCAGGAACAACCTTACCAGATTCTCCAAGAGACACGCCAAGAGGCTTGGACCTTGACGATGCAACAGGGAAAATTACAGACTCTTCAAAGCAGTTGAAAGATTCTTACCAAGAACCAAGTAAGGACAGCAAGATCAAGCATCAGCTTGATAATTTGAACTCTAGGGTTGGAATTTCAGATGAAGAGCCATCAGAGTTGCCTTCTTCAGTGCCAGCAGTCCAAAATGTTGCAGAAGAATATGGTGCTTTTAGAGATATTGAAGCAATCAAGAAAAAGCACATTCCACTTCTGGACCAAGCCATAGCGAAGCACCCATCTCTTTGGGCTTGGCATGAGAAATTTAAGCATCCACAGATGAAGCAATTTGGATACACCATGTTAGGTAATATGTTAGAGTTTCTTGCATCAACAAGGTGGAGAGATCTCACTGAAGATAAAAAAGCTGAATTGCAGTCATTAGTGGATGTATTGGAGACACTAGGCTTCGACCTTCAGTTTTTAGGGAATGTTCGTGCCATGATTAATCAAAGCAATGAGGAAACTGTTAATCACATTGAGGCACTTGAAGAGCAGGTGGCAGCACTAGAGATTGGGCTGGAAAACATCAAGATTGAGCTTCGCAAGTTCAGTGGCTTCAtaggattttg 3974 0.3626 MTEIGASVASEIVKRVLDTAIRRARYSFCFNKYVEDLRREKGLLTRTREIVKQRIRKSRQETKNVDDDINWLKEADSLIEEVQKLEEKANSNKSCFGHFPSCIRRYRLSKLAEKKTQAVTDLNQKGNSPRLSRLATLPGMRYFSSIEGFFHSENTRMAHDELLEALQDDEVFMVGLYGMGGCGKTTLAKQVGNEAENIFDKVAFAIVSNNVDVHKIQGEIASYLDLPLKERESTLERARRLWARLASGQKILIILDDVWGKLDFEIIGIPFRENRTGCKVLLTTRRLQLCNVMSCQRTIPLSLLNEEEAWTLFQKHSGIVDETSDSLKDLAKEIVKECTGLPIAIEAVASTLKGKSESGWKESLERLKETALIDVEEGLRDPYTCLQRSYDNLKDEEAKSIFLLCSIFPKDCEIHEEYLARYGIGLGLFGEVSSYARARNKVLEAKNKLIDFCLLLKGNKKNYVKMHNVVRAMALSVAKKEKKVIMEIESSGRNITWKENITIKYLWYFNIQESDRLSYLLSCPKLEFLCVILKNPILDDGVFKTMKDLRVLLFQHKEGLSRGILSGAKSIQSLTNLRSLFLEGWNLGYISFIGSLERLESLVLWSCSFVELPDKITELPKLKLLDLWYCVIKRNPGEVIRRCSQLEELYFLRNSGWKEEGEIAVVATSALHRYRIDLGGCYQSGEEDFSISRGLWMKNLDAFTTNATIKDLAQRAEFLEIREIVNSGGKNIIPVYTEKKSITPNYTKKKSIIPDYTIKKNIIPDMVDAKGGGMNELTELHLWNFDKIECFADTSDPLMTENVFSNLVKLHISQLKGLKTLCHGPHVGSLKLFCSLKVLSLSYCPMMTSVFTRVVAQSLVVLEELEIKDCDGLKHIVRDEEKDNNEKHYNLMFPKLRRLSISDCYKLEYLFPVSFNESLVQLESLTIQYAPKLIYVFDQSSINHEEHNQKRLPTINLPSLKTIVLYNLSNIKAICPEKYGLSLPYLKELQWGSCPVLMVESISKCVDGGSRVITPMAIQNKKENAKENHKRFPEPEKSMEPSNNRVSEALDSEKLENAGRTSPISQSLFSMAIAAEERDNIKKMEEKNITEQSTMSKSYPESAEAHETLAGTTLPDSPRDTPRGLDLDDATGKITDSSKQLKDSYQEPSKDSKIKHQLDNLNSRVGISDEEPSELPSSVPAVQNVAEEYGAFRDIEAIKKKHIPLLDQAIAKHPSLWAWHEKFKHPQMKQFGYTMLGNMLEFLASTRWRDLTEDKKAELQSLVDVLETLGFDLQFLGNVRAMINQSNEETVNHIEALEEQVAALEIGLENIKIELRKFSGFIGF 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03270 1324 Pfam NB-ARC domain 161 391 IPR002182 GO:0043531
Bva12g03270 1324 MobiDBLite consensus disorder prediction 1019 1063 - -
Bva12g03270 1324 Gene3D - 389 476 IPR036388 -
Bva12g03270 1324 Coils Coil 72 92 - -
Bva12g03270 1324 MobiDBLite consensus disorder prediction 1143 1158 - -
Bva12g03270 1324 Gene3D Ribonuclease Inhibitor 758 951 IPR032675 -
Bva12g03270 1324 Gene3D - 303 388 IPR042197 -
Bva12g03270 1324 MobiDBLite consensus disorder prediction 1022 1038 - -
Bva12g03270 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 405 IPR027417 -
Bva12g03270 1324 Gene3D - 143 299 IPR027417 -
Bva12g03270 1324 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 5 744 - -
Bva12g03270 1324 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 832 889 - -
Bva12g03270 1324 Coils Coil 1280 1314 - -
Bva12g03270 1324 Gene3D Ribonuclease Inhibitor 499 730 IPR032675 -
Bva12g03270 1324 PRINTS Disease resistance protein signature 173 188 - -
Bva12g03270 1324 PRINTS Disease resistance protein signature 831 847 - -
Bva12g03270 1324 PRINTS Disease resistance protein signature 245 259 - -
Bva12g03270 1324 PRINTS Disease resistance protein signature 338 352 - -
Bva12g03270 1324 MobiDBLite consensus disorder prediction 1121 1136 - -
Bva12g03270 1324 MobiDBLite consensus disorder prediction 1084 1159 - -
Bva12g03270 1324 CDD AAA 158 284 - -
Bva12g03270 1324 SUPERFAMILY L domain-like 465 1005 - -
Bva12g03270 1324 PANTHER - 5 744 - -
Bva12g03270 1324 PANTHER - 832 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03270 Bva-Chr12 23540352 23545683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03270 170 506 WRKY Transcription Factor Family AT5G45050 26.453 1.01e-13 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03270 - - lang:109340689 800.431