Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03251 atgttcATCATCTTAACCTTCATGAAGAGCTTTATTCTTGCTTTGCACAGACCCAACAGAGCCTATATCAGCAAACGAAACAAAGgtATATGGATGGATCATCTATGGGACCAAAAGGGAAGTTTTGGTGACGCGTTTAAGAAACATGAACAAAGATATACGGAAGACAGGATTAAAAGATGGAGAGATGCCTTAACAGAAGTTGCTGCTTTACGGGGATGGCACTCCAAGGATagGCACCACTCACAAGTCATTGAAGAACTTGTAGCTGAACTATGGCAAAAACTACAAGCTAATGGTAAAATGCGTTTGGGGATGCATGATATGTTGCAAGAAATGGGTAAGAATATTGTCATTCATGAATCCCTTGATGCAGGAAAGCGCAGTAGGTTGTGGTTACAAGAGGATATTGATCATATATTGACCAACAATAAGGGAAGTGAATTTATTCAAGGTATAGTTTTGGATTCTCTTTGGTCATTTGAAGCAAGTTGGCACCCTGAAGCCTTCTCAAAGACATGTAATATTAGATTATTGATGTTGAAATATCCAGATCTTATGTTGGGTGTCAATTGTCTTCCGGAAGGATTAAAATATCTTGAATGGGAGAAATTTCCCTTGAAAGAGTTGCCACTTGGTTTTCAGCTGAATGAACTTGTTGAACTTATCATGCATCGTAGCAAAATTCAGGAACCCTGGCATGGAATAAAGTATTTTGGAAAGCTGAAGCTTATTGATTTGGAAGATTCTAAGGATCTAATTCGATTTCCTAGTGTTTCTGGGATTCCCCATCTTGAACGGTTGGTCCTTCAAAGCTGTATAAATCTTATAGAGGTTGACCAATCTATTGGAGTACACAAGAAGCTTATGGTATTGAACTTGAGAAATTGTGCAAAACTTAAAGTCCTTCCAAGAAAGCTGGAAATGGATTCTCTGAAGGAGCTCGTTCTATCAGGTTGCTCTAAATTTTCTAGGCTGCCAGAGAATTTGGATGAAAACGAGGCTTTGGAGGCACTTGATGTGAGTGGAACTGCCATAAGAGAAGTTCCTGACTCTATTGTTCatctaaaatatctaaaaagaTTATCTTTTGGTGGACGCAGAGATTTAGAATCCAACTCCTGGAACTTATCTCTTCCCTTTCTGTCAAAGTTTTGTAAGCGCCCAGTTTCCACGGGCATGATGTTGCCTGCCATGGCGAGCTTCTCCTATTTAGagtcattaaatttaagttactGTAATCTTAGTGACGAATCGCTTCCTGCTGAACTTGGCTTCTTGTCATCATTGGGGGAGTTAGATCTAAGTGggaacaattttattaaccTGCCTTCTAGATGCTTTGCTAATCTTTCTAAGCTATATTCTCTCAAGTTAGATTGCTGTCCAAGGCTTCAGTCCATACCCATGCCTCCTCCAAGTGTAGAATGGTTACATGGAAGAAATTCTGCTTCATGGAATCTATTTTCAGATCCACAATTTCTTTGTGATTATTTTTCATCACGCCAACTGATGGAATCTCTGTTCGAACCTTTTCTGATAATTCCAGGGAATGAGattcccacatggtttagcaatcaaaatttctttcatcTGGATATACAGTCACCATTTAATTGGGAAGTAATCTCTGAAAGTGGCTTTATCTACATCAACGAAACAATTTCACCTATTTCTCTAGATTCATTCACATCAATAATGGTAGACATCCCACATGATTGTCTTTCAAGTGAATGGTGGGGAATTGCTGTATGCCTTGTGTTTGAAAATCAGTGTCCTGATTGGTTTGGTCCCTCTCTTCGGTGGATTTGCAAAACTCCTGAAGCTGAGTTGCCCATTCCCTCGGGGAAATATCGTATGCTTCGGATTGAAGATTTTAGCTACTCTCACTTGTGCATCTTATTGTTGAGAGGCAACGATAGAAACATTCAACGGCATCTAAGAAGTGATCAAAGCCagcttcaattattattttatgcagATGCTATGGCTCGTGATGGTGAAATGGACTACAAATTTTGTAGCATGAACATAAGCAAGTGTGGATGCCGTGTGTTAAGTAAGGAAGATTTGGAAGTATGGAGCAAAGCAATGGATGAACGAAAACAAAGTAGTAACTTTGAGATCCCTTCAAGCAGTCTCAGCAAATCAAGACTAAGAGAAATTGTGGATGATAATCAATGCTGTGATGGGTTTGAGGGAGAATTTGCAAGCACATCAAATGCAGAagcaaaacgaagaaaacttGGCTA 2252 0.3739 MFIILTFMKSFILALHRPNRAYISKRNKGIWMDHLWDQKGSFGDAFKKHEQRYTEDRIKRWRDALTEVAALRGWHSKDRHHSQVIEELVAELWQKLQANGKMRLGMHDMLQEMGKNIVIHESLDAGKRSRLWLQEDIDHILTNNKGSEFIQGIVLDSLWSFEASWHPEAFSKTCNIRLLMLKYPDLMLGVNCLPEGLKYLEWEKFPLKELPLGFQLNELVELIMHRSKIQEPWHGIKYFGKLKLIDLEDSKDLIRFPSVSGIPHLERLVLQSCINLIEVDQSIGVHKKLMVLNLRNCAKLKVLPRKLEMDSLKELVLSGCSKFSRLPENLDENEALEALDVSGTAIREVPDSIVHLKYLKRLSFGGRRDLESNSWNLSLPFLSKFCKRPVSTGMMLPAMASFSYLESLNLSYCNLSDESLPAELGFLSSLGELDLSGNNFINLPSRCFANLSKLYSLKLDCCPRLQSIPMPPPSVEWLHGRNSASWNLFSDPQFLCDYFSSRQLMESLFEPFLIIPGNEIPTWFSNQNFFHLDIQSPFNWEVISESGFIYINETISPISLDSFTSIMVDIPHDCLSSEWWGIAVCLVFENQCPDWFGPSLRWICKTPEAELPIPSGKYRMLRIEDFSYSHLCILLLRGNDRNIQRHLRSDQSQLQLLFYADAMARDGEMDYKFCSMNISKCGCRVLSKEDLEVWSKAMDERKQSSNFEIPSSSLSKSRLREIVDDNQCCDGFEGEFASTSNAEAKRRKLG 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03251 750 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 100 504 - -
Bva12g03251 750 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 100 504 IPR044974 GO:0006952
Bva12g03251 750 Gene3D Ribonuclease Inhibitor 155 378 IPR032675 -
Bva12g03251 750 Gene3D Ribonuclease Inhibitor 391 502 IPR032675 -
Bva12g03251 750 Gene3D - 29 102 IPR035897 -
Bva12g03251 750 SUPERFAMILY L domain-like 153 483 - -
Bva12g03251 750 Pfam TIR domain 36 98 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03251 Bva-Chr12 23380852 23384518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03251 106 445 WRKY Transcription Factor Family AT4G12020 35.457 2.08e-38 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03251 - - gmx:100799850 418.313