Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03250 ATGGACAAAGATGAGGTGACACATATACTAGAAATATGCGACCTTTATCCAATTATTGGAATAAGTGTTCTGCTTGAGAAGTGCTTGCTCACTGAATATTATGAGTATGATAAATGGTGTTTGGGGATGCATGATATGCTTCAAGAAATGGGAAAGAACATTGTTATTCGTGAATCAAATAATGATGTGGGAAAACGCAGTAGGTTGTGGTTGCGAGAAGATATTGATCATgtgttaacaaaaaataagGGAACTGAGGTCATTCATGGCATAGTTCTGGACTCGCGTAGGCCATACAAAACACATTGGGACCCTGTGGCCTTCTCAAAGATGtgtaatcttaaatttttgattttgaaatatttggaTCTTCCACATGGTCTATATTGTCTTTCAGAAGGATTGAAATACCTTGAGTGGGAGAATTTTCCTTTAGAAGAATTGCCGCTCGGTCTAAAACTCGATGAACTTGTTGAACTTACAATGCATCATAGCAATATCAAGCAACTTTGGAATGGAACAAAGtTTTTCAGAAAGCTGAAGCTCATTGATTTGAAAGATTCGATAGATCTGATAAGATTTCCTAGTATTTCTGGGGTTCCATGTCTTACAAGGTTGGTTCTTGAAGATTGTGTAAATCTTGTTGAGGTTGACCAATCTGTTGGACTGCACAAGAAGCTTATGGTACTAAACTTGACAAATTGTGTAAATCTTAAAATCCTTCCAAGAAAATTGGAAATGGATTCTTTGAAGGAGCTCATCCTTTCAGGctgttcaaaaattaaaaagcttcCCGAGTTTGGGGACAATATGGAATTGCTAACAGAGCTTAATTTAAAGGGCTGCAAAAGTCTTGTTTGCCTTCCAAAATCCATTCACAATTTAAAATCACTGAGAATTCTCAATACTTCAGgttgtttcaaattttctatgcTGCCAGAGGATTTGGAAAAAAACAAGGCTTTGGAGGAGCTTAATGTGAGTGGAACTGCTGTAAGAGAAGTACCTCCCTCCATTGCCCGTTTAAAATCCCTCAAAAAACTATCTTTGGGTGGACACAGAGAGATGGAATCCAACTCATGGAACTTACCTCTCCCCTTTAGATGGAAGCTTTGGAAGCATCCAGTTTCCAAGGCCATGATGTTGCCTCCTGTCTCAAGCTTTCCCCTTTTGCAGGAATTATGTTTAAGTTACTGTAATCTTAGCGATGAATCACTTCCTCTTGATATCGGTTGCTTATCATCATTGGCAAAATTAGATCTAAGTGGGAACAATTTTAGTATCATACCCACTAGCTGCATTGCTAATCTTTCCAAGCTTTATTATCTCAAATTAGATTGCTGCCCACTGCTTCAGTCGGTACCTATGCTTCCTCCAAATGTAGAACGGCTATATGGAAGAAATTCTGATTCATGGAAACCTTTCTCAGATCCACTAGACCTTTGTGATTATCTTTCTTCACACATACAGATGAAATCTGGGAACGATCCGTTTTTGATGATTCCAGGGAATGAGATTCCGCCATTGTTTAGCAATCAAAATTACTTTCAGCTGAATATTCAGTCAACATTTATCTGGGAAGTGATATTTGGAATTGACTTTGTCTCGAGAACGACTTCGCCGGATGCTTGTCATTCATTGATGTCAATAATGGTAGACATCCCTGATTACTGTATTTCAAGTGAATGGTGGGGAATCGCAGTATGCCTTGTGTTAGAAAATCCATTCCCGGCTTCTAGTTGGTTTTCTGCTCCACTTTACTGGATGTGTAAGACGCCTGGAGCTGAATTCCCCCTCCCCTCTGGTAACATATACGTGGGCCGGATTGAAGAGTTTGCTGATCCTCACTTGTGCATTTTATTGTTGAGAGGTGACGATAGAAACATTCAGCGACATCTGAGAGGTAATCATGGGCAACttcaattgttattttatgctGAAGCTAATGCTCATGAGGATGATGAAGCTGATGACCCTGGTATGTTGAACATAAGCAAGTGTGGGTGCTGTGTGTTGTGCAAGGAAGATTTGGAAGTGTGGGGCAAAGCTAtgattgaaagaaaacaaagcaatGACTTTGAGATATCTTCCAGCAGTCTGTACAAGTCAAGATTAAGAGAAATATTTGATGAGAATGCATGCTGTGATGGATTTGAGGGAGAATATGCAACTGCAAGTACTTCAAATGCAGAAGCAAAACGAAGAAGACTTGGATA 2216 0.3768 MDKDEVTHILEICDLYPIIGISVLLEKCLLTEYYEYDKWCLGMHDMLQEMGKNIVIRESNNDVGKRSRLWLREDIDHVLTKNKGTEVIHGIVLDSRRPYKTHWDPVAFSKMCNLKFLILKYLDLPHGLYCLSEGLKYLEWENFPLEELPLGLKLDELVELTMHHSNIKQLWNGTKFFRKLKLIDLKDSIDLIRFPSISGVPCLTRLVLEDCVNLVEVDQSVGLHKKLMVLNLTNCVNLKILPRKLEMDSLKELILSGCSKIKKLPEFGDNMELLTELNLKGCKSLVCLPKSIHNLKSLRILNTSGCFKFSMLPEDLEKNKALEELNVSGTAVREVPPSIARLKSLKKLSLGGHREMESNSWNLPLPFRWKLWKHPVSKAMMLPPVSSFPLLQELCLSYCNLSDESLPLDIGCLSSLAKLDLSGNNFSIIPTSCIANLSKLYYLKLDCCPLLQSVPMLPPNVERLYGRNSDSWKPFSDPLDLCDYLSSHIQMKSGNDPFLMIPGNEIPPLFSNQNYFQLNIQSTFIWEVIFGIDFVSRTTSPDACHSLMSIMVDIPDYCISSEWWGIAVCLVLENPFPASSWFSAPLYWMCKTPGAEFPLPSGNIYVGRIEEFADPHLCILLLRGDDRNIQRHLRGNHGQLQLLFYAEANAHEDDEADDPGMLNISKCGCCVLCKEDLEVWGKAMIERKQSNDFEISSSSLYKSRLREIFDENACCDGFEGEYATASTSNAEAKRRRLG 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03250 738 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 249 500 - -
Bva12g03250 738 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 266 - -
Bva12g03250 738 SUPERFAMILY L domain-like 91 355 - -
Bva12g03250 738 Gene3D Ribonuclease Inhibitor 245 363 IPR032675 -
Bva12g03250 738 Gene3D Ribonuclease Inhibitor 375 470 IPR032675 -
Bva12g03250 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 266 IPR044974 GO:0006952
Bva12g03250 738 Pfam Leucine Rich Repeat 157 175 IPR011713 -
Bva12g03250 738 SUPERFAMILY L domain-like 312 458 - -
Bva12g03250 738 Gene3D Ribonuclease Inhibitor 100 244 IPR032675 -
Bva12g03250 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 249 500 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03250 Bva-Chr12 23372659 23375381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03250 1 348 WRKY Transcription Factor Family AT4G12020 34.635 4.17e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03250 - - gmx:100799850 567.385