Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03248 ATGCTTCAGGAAATGGGTAAGAATATTGTTATTCATGAATCAAATAATGTGGGGAAACGTAGTAGGTTGTGGACGAAAGAAGATATTAATCTTGTGTTGACAAAAAATAAGGGAACTGAGGTTATTCAAGGCATAGTTCTATCCTCACGTACACCATGTGAAGCATACTGGGACCCAAATGCCTTCTCAAAGATATGCAATCTTAAAGTGTTGAAGTTGAATAGTCTAAATCCTCTGCTTGGTCTCAATTGTCTTTCAGAGGGACTACGATATCTTGAATGGGAGGAGTTTCCTTTGGAAGAATTGCCACTTGgtatccaacttgacgaacTAGTTGAACTTACAATGCAACATAGCAAAATTAAGCAACTTTGGCATGGAACGAAGTACTTTGGAAAGCTAAAGCTCATTGATTTGAGATATTCTATGGATCTAATCCAGTTTCCTAGTATCTCTGGGGTCCCATATCTTGAACGCGTAATCCTTCAAGGTTGTAAAGCCCTTCAAGAGGTTGACCAATCTGTTGGACAACACAAGAAGGTTATGGTACTAAACTTGAAGAATTgtgaaaaacttaaaattcttCCGAGAAAACTGGAAATGGATTCTTTGAAGGAGCTCATTCTTTCTGGCtgttcaaaagttaaaaagctTCCAGAGTTTGGGGACAATATGGAATTACTAACGGAGCTTAATTTACAAGATTGCAAAAATCTTGTTTGCCTTCCAAGGtccatttataatttgatatctCTTAGAATTCTCAATACTCTCGGTTGTTCTAACCTATCTATGCTGCCAGAGAATTTGGACAAAAATGTGGCTTTGGAGGAGCTTAATGTGAGTGGAACTGCTATAAGAGAAGTACCTTCTTCCATCgttcatttaaaatatcttagaaAATTATCCTTAAGTGGACACAAAGAGATGGAATCCAACTCTTTGAGTTTATCCCTCCCTTTGCGGTGGATGTTTCGGAGGCATCCCATTTCCACAGCCATGATATTGCCTCCTTTGTCATGTTTTTCCCTTTTGGAGGAATTGGATTTAAGTTATTGTAATCTTCGCGATGAGTCACTTCCTGTTGATCTTGGCTGCTTATCATCATTGAGGAAGTTAGATCTAAGtgggaataattttattaacctTCGTCCTTGTAGCATTGCTAATCTTTCTAAGCTATACTATCTTAAGTTAGATTGTTGCTCAACACTCGAGTCGGTACCTGTGCTTCCTCCACATGTAGAAAGATTATATGGAAGAAATTGCGCGTCATGGAAACCATTGTCTGATCCAGTAgacttttgtgatttttttgcATCTCACCAGCAGATGAGAACTCGGTATGCACCTTTCTTCATTATTCCAGGGAATGAAATTCCACCATGGTTCAGTAATCAAAGTTATTTTCATATGAAGATACATTCGCCATTTCGGTGGGAAACCGTTGTTGAAGGTGACTTCATTCGCAACAGCAGAACCCTTTCACCTAGTGCTTGTGATTCATTGATCTCAATAACTCTAGACATCCCTCATCATTGTCTTTCAAGTGAATGGTGGGGAATTTCTGTCTGCATTGTGGTAGAAAATCAGtttccttcttcttgttgGTACTTTGCTCCTCTTTATTGGATTTGTAAAACTCCGGGAGCTGAATTGCCCGTCCCCTCGGGTAGCTTACACCCGGGCTGGATTGAAGAGTTTAGTGACCCTcatttatgcattttattgCTGAGTGGTAATGAGAGAAATATTCAGCGGCATTTAAGAGGTGACAACAACCAACTTCAGTTATTATTTTTCGCCGAAGCTATTCCTTATGAGGACGATCTATCTGATGATCCTGGTATGTTAAACATGACCAAGTGTGGGTGCCGTGTGTTATGCAAGGAAGATTTGGAAGTTTGGAGCAAAGCAATGAGTGAACGAAAACAAAGTAATAACTTTGAGGTCCCATTCAGCAGTCTAAATAAATCAAGAATAAGGGAAATAGCTGATGACACTGAAGGTTATGATGGATTTGAGGGAGAATCTGCAGATATagtaaaacgaagaaaacttGAATA 2066 0.364 MLQEMGKNIVIHESNNVGKRSRLWTKEDINLVLTKNKGTEVIQGIVLSSRTPCEAYWDPNAFSKICNLKVLKLNSLNPLLGLNCLSEGLRYLEWEEFPLEELPLGIQLDELVELTMQHSKIKQLWHGTKYFGKLKLIDLRYSMDLIQFPSISGVPYLERVILQGCKALQEVDQSVGQHKKVMVLNLKNCEKLKILPRKLEMDSLKELILSGCSKVKKLPEFGDNMELLTELNLQDCKNLVCLPRSIYNLISLRILNTLGCSNLSMLPENLDKNVALEELNVSGTAIREVPSSIVHLKYLRKLSLSGHKEMESNSLSLSLPLRWMFRRHPISTAMILPPLSCFSLLEELDLSYCNLRDESLPVDLGCLSSLRKLDLSGNNFINLRPCSIANLSKLYYLKLDCCSTLESVPVLPPHVERLYGRNCASWKPLSDPVDFCDFFASHQQMRTRYAPFFIIPGNEIPPWFSNQSYFHMKIHSPFRWETVVEGDFIRNSRTLSPSACDSLISITLDIPHHCLSSEWWGISVCIVVENQFPSSCWYFAPLYWICKTPGAELPVPSGSLHPGWIEEFSDPHLCILLLSGNERNIQRHLRGDNNQLQLLFFAEAIPYEDDLSDDPGMLNMTKCGCRVLCKEDLEVWSKAMSERKQSNNFEVPFSSLNKSRIREIADDTEGYDGFEGESADIVKRRKLE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03248 688 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 220 - -
Bva12g03248 688 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 228 462 - -
Bva12g03248 688 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 228 462 IPR044974 GO:0006952
Bva12g03248 688 Gene3D Ribonuclease Inhibitor 201 273 IPR032675 -
Bva12g03248 688 Gene3D Ribonuclease Inhibitor 45 200 IPR032675 -
Bva12g03248 688 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 220 IPR044974 GO:0006952
Bva12g03248 688 SUPERFAMILY L domain-like 57 410 - -
Bva12g03248 688 Gene3D Ribonuclease Inhibitor 274 430 IPR032675 -
Bva12g03248 688 Pfam Leucine Rich Repeat 111 129 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03248 Bva-Chr12 23357985 23360675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03248 1 302 WRKY Transcription Factor Family AT4G12020 35.988 3.46e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03248 - - gmx:100799850 534.643