Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03246 ATGCATGATATGCTTCAAGAAATGGGTAAGAATATTGTTATTCATGAATACCCTAATGATGTTGGCAAACGTAGTAGGTTGTGGTTGCAAGAAGATGTTGATCATGTATTGGCAAAAAATAGGGGAACCGAGGCTATTCAAGGTATAGTTCTGAACTCTTGGAGGCGATATAAAGCACATTGCGACCCAGATGCCTTCTCGAAAATGTGTAATCTCAAAGTGTTGAagatatatagttttaatCCTCTGCTTGGTCTCAGTTGTTTTTCAGAGGGATTAAGATATCTTGAATGGCAGGGATTTCCTTTAAAGGAATTGCCACTTGGTGTTAAACTTGATGAGCTTGTTGAACTTCGAATGCATCATAGCAAAATCAAGCAACTTTGGCATGGAGAAACGattttcaGAAAACTAAAGGtcattgatttaaaattttctaaggaCCTCATTCAATTTCCAAGTGTTTCTCGAGTTTCATATCTTGAACACTTGGTTCTTGAAGGTTGTACAAACCTTCTAGAGGTTGACCAATCCGTTGGACTGCACAAGAAGCTCATAATACTAAACTTGAGAGATTGTGTAAATCTTAAAATCCTTCCAAAAAAACTGGAAATGGATTCATTGAAGGAGCTTATTCTTTCAGGCTGTTCAAAAGTAAAAAGGCTTCCAGAGTTTGGGGACAATATGGAACTGCTAacagagcttaatttacaggATTGCAAAAGTCTCGTTAGCCTTCCAAAGTCCATTCATAAGTTGAAATCTTTGAGAATTCTCAATACTTTAAGTTGTTCTAACTTAACTATGCTACCAGAGAATTTGGACAAAAATGAGGCTTTGGAGGAGCTTAATGTGTGTGGAACTGCCATAAGAGAAGTACCTCCCTCCAttgttcatttaaaatatcttagaaAGTTATCCTTAAGTGGACAGCGAGAGATGGAATCCAACTCTTGGAATATAGCTCTCCCTTTTCAATGGATTATGCCTTTTAGGCATCCTGTTTCCATGGGCATGACATTGCCTCCGGTGTCACGTTTCTCCTTTCTAGAGGAATTAGATTTGAGTTATTGTAATCTCCGCGATGAATCACTTCCGCTTGATCTTGGCTGCTTATCATCATTGGAGCATTTAGATCTGAGTGGGAATAACTTCACAAATCTACCAGCTAATTATATGGAAGAAATTGTTCTTCATGGAAACCATTatctttgtgatttttttgcATCGCACCAACAGATGAGACGTTGGTATGGACCTTTTTTCATTATTCCAGGGAATGAAATTCCTCCATGGTTCAGCAATCAAAATTCCTTTCATATGGAGATACGTTCGCCATTTCCATGGGAAACAGTGAATAGAAGAGGCATTGTTGACACCAGAAGAAGAATTCTACCTAGTGTTTGTGATTCATTGATATCAATAATTGTAGATATTCCTCATTATTGTCTTTCAAGTGAATGGTGGGGAATTGCGGTATGCCTTGCATTGGAAAATCAGTTTTCTTGTCGTTGGGATTTTGATCCACTTTATTGGATTTGTAAAACTCCGGAAGCAGAATTGCCTGTCCCATCTGGTAACATTCACCCGGGCATGATTGAAGAGTTTAGTGATCCACACTTGTGTATTTTATTGCTGAGTGGCGATGAGAGAAATATTCAGCGCCATTTAAGCAGTGGCAGCAACCAGATTCAACTGTTATTTTTTGCTGAAGCAACTCCTTATGAAGATGATGACATTGATGACCCTGGTATGCTGAACATAAGCAAGTGTGGGTACCGTTTGTTATGCAAGGAAGATTTGGAAGTTTGGGGCAAAGCAACGAGGGAACGAAAACAAAGCAATAATCTGGAGATCCCTTCCAGCAGTCTCAACAGTTCAAGAATAACAGAAATTGTGGGTGACAGTGAATGCCACCATGGATTTGATGGAGAATCTGCAAATACTTCAAATGCAgaatcaaaaagaagaaaactaagaTA 1982 0.3688 MHDMLQEMGKNIVIHEYPNDVGKRSRLWLQEDVDHVLAKNRGTEAIQGIVLNSWRRYKAHCDPDAFSKMCNLKVLKIYSFNPLLGLSCFSEGLRYLEWQGFPLKELPLGVKLDELVELRMHHSKIKQLWHGETIFRKLKVIDLKFSKDLIQFPSVSRVSYLEHLVLEGCTNLLEVDQSVGLHKKLIILNLRDCVNLKILPKKLEMDSLKELILSGCSKVKRLPEFGDNMELLTELNLQDCKSLVSLPKSIHKLKSLRILNTLSCSNLTMLPENLDKNEALEELNVCGTAIREVPPSIVHLKYLRKLSLSGQREMESNSWNIALPFQWIMPFRHPVSMGMTLPPVSRFSFLEELDLSYCNLRDESLPLDLGCLSSLEHLDLSGNNFTNLPANYMEEIVLHGNHYLCDFFASHQQMRRWYGPFFIIPGNEIPPWFSNQNSFHMEIRSPFPWETVNRRGIVDTRRRILPSVCDSLISIIVDIPHYCLSSEWWGIAVCLALENQFSCRWDFDPLYWICKTPEAELPVPSGNIHPGMIEEFSDPHLCILLLSGDERNIQRHLSSGSNQIQLLFFAEATPYEDDDIDDPGMLNISKCGYRLLCKEDLEVWGKATRERKQSNNLEIPSSSLNSSRITEIVGDSECHHGFDGESANTSNAESKRRKLR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03246 660 Gene3D Ribonuclease Inhibitor 336 419 IPR032675 -
Bva12g03246 660 ProSiteProfiles Leucine-rich repeat profile. 374 395 IPR001611 GO:0005515
Bva12g03246 660 Gene3D Ribonuclease Inhibitor 55 204 IPR032675 -
Bva12g03246 660 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 226 - -
Bva12g03246 660 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 226 IPR044974 GO:0006952
Bva12g03246 660 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 232 391 - -
Bva12g03246 660 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 232 391 IPR044974 GO:0006952
Bva12g03246 660 Pfam Leucine Rich Repeat 115 131 IPR011713 -
Bva12g03246 660 MobiDBLite consensus disorder prediction 637 660 - -
Bva12g03246 660 SUPERFAMILY L domain-like 53 417 - -
Bva12g03246 660 Gene3D Ribonuclease Inhibitor 205 322 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03246 Bva-Chr12 23331055 23333739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03246 1 306 WRKY Transcription Factor Family AT4G12020 35.088 2.88e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03246 - - gmx:100799850 495.738