Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03244 ATGGGTAAGAGTATTGTTATTCATAAATCTCCAGATAATGCCGGAAAACGTAGTTGGTTGTGGTTGAGTGAAGACATTGATCATgtattgacaaaaaataaggGAACTGATGCCATCCAAGGTATTGTTCAGGAAACTCATAGACCATATAAAGGTCATTGGGACCCTAATGCATTCAAAGAGAtgataaatcttaaattattgatattaagATCTTGGGATCTTCCACTTGGTCTCACTTGTCTTTCAGAAGGGTTAAAGTATCTTGAATGGGAGGAATTTCCTTTGAAGGAATTGCCGCTTGGTGTGCAACTCAATGACCTTGTTGAGCTTACAATGCAACATAGTAAAATTAAGCAACTTTGGCTTGGAACAAAGAATTTCGGAAAGCTGAAGCTCattgatttgaaatattcCAAGGATATAAAGCAATTTCCTAGTGTTTCTGGGGTTCCATGTCTTGAACTGTTGGTTCTTGAAGGTTGTATAAACCTTGTTGAGGTTCACCAATCTGTTGGATTGCACAAGAAGCTTATGGTACTGAACTTGAGAAATTGTGTAAATCTTGAAACACTTCCAAGTAAACTGGAAATGGATTCTTTGAagaatttcattctttcaggttgttcaaaagttaaaaaacttCCAGAGTTTGGGGGCAATACGGAATTTCTATCAAAGCTTGATCTAAAGGATTGCAAAAGTCTTCTTTGTCTTCCAGGATCCATTATGAAGTTGAAATCTCTCAAAATTCTCAATACTTCTGGTTGTTCTAAATTATCTAGGCTTCCTGAGAATTTAGACAAAAATGAGTCTTTGGAGGAACTTATTGTTAGTGGAACTGCCATAAGAGAAGTACCTTCCTGCATTTCTCatctaaaatatcttaaaaaattatctttgagTGGGCATAAAGTGACAAAATCCAACTCTTCAAGTCTATCTTTCCCCCTTCAATGGATGTTTGGGAGGCGTCGTGTTTCCACTGGCATACTCTTGCCTCCTTTGTcaagcttttcctttttggagGAATTAGATTTAAGTTACTGTGATCTTACGGATGAATCACTTCCTGTTGATCTTGGCTGCTTATCATCATTGAGGAAGTTAGATATAAGTGggaacaattttattaaccTACCAGCTAGCTGCATTGCTAGTCTTTCAAAGCTATATTATCTTAAGTTAGATTGTTGCCCAAGGCTCGAGTCAGTACCTATGCTTCCTCCACATATAGAATACTTGTATGGAATAAACTGTACTTCATGGAAACCGTTGTCAGATCCACAATacctttgttattttttgaagTCATATCAAAAGATGAGATCTGGGTACCAACctttttggatttttcctCGGAGTGACATTCCACCATGGTTCAGCAATCAAAATTACTTTCAGCAGGAGTTACGTTCATCATTTCGTCGGGATATAACATCTGAAAGTGATTATTCTAGAGATTGGGGTTCTGCCGGAATGCATCTGTCCGGGGCTTGTCATTCAATGATGTCAATAATAGTTGACATCCCACAGTTTTGCCTTTCCAGTGAATGGTGGGGAATTGCTGTATGTCTTGTGTTAGAGAATCAgtttcttccttctccttGGTTTGTTCCTACACTTGAATGGATTTGTAAAACCCCTGAATCTGATACGCCAAGTCCCTCAGCTTCCTCGTATGTGTGCTGGTTTGAAGAGTTCAGTGGCTCACACTTGTGCATTTTATTGTTGAATGGTTTTGATAGAAATATTCAGCAGCAGCTTAGAGCTGATCAAAACCAAAttcaattatcattttatgctCAAGCTATTCCTCGCGGATCTGATTACTCTAGTTTGTTATACTTGAACATAAGCAAGTGTGGATGCCGTGTGTTATGTAAGGAAGATTTGGAAGAATGGAGGAAAGAATGGGGTCAACAACAGCAAGggaataattttgagatccaTTCCAGCAGTCTCAACAAATGCAGAGCAATACAAGATATGTATGATAATCAATGTTGTGATGGATTTGAGGAGGAACATGCAACAACATCAAATGCAGAaccaaaacgaagaaaacttGGAATGAAACGTTCTCAGTA 2090 0.3431 MGKSIVIHKSPDNAGKRSWLWLSEDIDHVLTKNKGTDAIQGIVQETHRPYKGHWDPNAFKEMINLKLLILRSWDLPLGLTCLSEGLKYLEWEEFPLKELPLGVQLNDLVELTMQHSKIKQLWLGTKNFGKLKLIDLKYSKDIKQFPSVSGVPCLELLVLEGCINLVEVHQSVGLHKKLMVLNLRNCVNLETLPSKLEMDSLKNFILSGCSKVKKLPEFGGNTEFLSKLDLKDCKSLLCLPGSIMKLKSLKILNTSGCSKLSRLPENLDKNESLEELIVSGTAIREVPSCISHLKYLKKLSLSGHKVTKSNSSSLSFPLQWMFGRRRVSTGILLPPLSSFSFLEELDLSYCDLTDESLPVDLGCLSSLRKLDISGNNFINLPASCIASLSKLYYLKLDCCPRLESVPMLPPHIEYLYGINCTSWKPLSDPQYLCYFLKSYQKMRSGYQPFWIFPRSDIPPWFSNQNYFQQELRSSFRRDITSESDYSRDWGSAGMHLSGACHSMMSIIVDIPQFCLSSEWWGIAVCLVLENQFLPSPWFVPTLEWICKTPESDTPSPSASSYVCWFEEFSGSHLCILLLNGFDRNIQQQLRADQNQIQLSFYAQAIPRGSDYSSLLYLNISKCGCRVLCKEDLEEWRKEWGQQQQGNNFEIHSSSLNKCRAIQDMYDNQCCDGFEEEHATTSNAEPKRRKLGMKRSQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03244 696 Gene3D Ribonuclease Inhibitor 326 444 IPR032675 -
Bva12g03244 696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 230 IPR044974 GO:0006952
Bva12g03244 696 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 230 - -
Bva12g03244 696 SUPERFAMILY L domain-like 53 442 - -
Bva12g03244 696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 228 434 IPR044974 GO:0006952
Bva12g03244 696 Pfam Leucine Rich Repeat 107 126 IPR011713 -
Bva12g03244 696 Gene3D Ribonuclease Inhibitor 48 321 IPR032675 -
Bva12g03244 696 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 228 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03244 Bva-Chr12 23323844 23326581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03244 2 299 WRKY Transcription Factor Family AT4G12020 38.024 6.93e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03244 - - vun:114195147 510.375