Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03243 ATGTTAGGCAGAGAGGTTTTTCCGATCTTCTATGATGTAGATCCCTCTGATATAAGGTACCACAAGGGAAGTTTTGGCAAAGCTTTCAAAAAACACGAAAAAAGATATAGAGAagacaaagttaaaaaatggAGAGATGCCTTAGGAGAAGTTGCCGGTTTATCTGGATGGCACACCAAGAATAGGTATCACTCGGAGATCATTGAGAAAATTGTAGCTGAACTATGGACAAAACTACAAGGTGAGGTGACACATCTGTTAGAAATATGTGGCCTTTATCCAATTATAGGAATAAATGTTTTGCTTGAGAAGTGCTTGCTCATTGAATATTGtgacaataaaaaatggtATCTGGGGATGCATGATATGCTTCAAGAAATGGGCAAGAATGTTGTTATTCAGGAATCAATTAATGATGCGGGAAAACGAAGCAGATTGTGGTTGCAAGAGGATATTGATCatgtattaataaaaaatatggGATCTCAGTTTATTCAAGGCATAGTTTTGGAGTCTTGGACACATAAAGCACTGTGGGACCCTAAAGTTTTGGAGTCTTGGTCATATAAAGCGCTGCGGGACCCTAAAGTTTTGGAGTCTTCGTCACATAAAGCACTATGGGACCCTAAAGCTTTCTCAAATATgtgtaatttgaaaatattgattttcataACCGTAGATCTTCCTTTGGGTCTTGATTGTCTTTCAGAAGGATTAAGATATCTTGAATGGCGAAAGTTTCCTTTAGAAGAGTTGCCACTTGATAATCAACTTGATGAACTTGTTGAACTTAAAATGATGCTTAGCAAAATTAAGCAACCTTGGCATGGAATAAAGtttTTCAGAAAGTTGAAGCTCATTGACTTGAGTAATTCTGAGGAACTCATTCGATTTCCCAGTGTTTTTGGGGTTCCATGTCTTGAACAGTTGATCCTTGAAGGCTGTATAAACCTAGAAGAGGTTGATCAATCTGTTGGACAGCACAAAAAGCTTATGCTACTGAACTTGACAAATTGTGTAAACCTTAAAATCCTTCCAAGTAAACTAGAAATGGATTCATTGAAGGATTTCATCCTTTCCGGCTgctcaaaagttaaaaagctACCAGAGTTTGGAGACAATATGAAAAACCTATCAAGCCTTGATTTAAAGGATTGTAGAAGTCTTGTTTGCCTTCCCAATTCCATTCATAACGCAAAATCTCTCAGAACTCTCAATATAATTGGTTGTTCTAAACTGTCTAGGCTGCCAGAGAATTTGGATGGAAATGAAGCCTTGGAAGAGCTTAATATGAGTGGAACTGCCATAAAAGAAGTACCACCCTCCATTATTCTCTTGAAAggcctaaaaaaattatctataggTGGacacaaagagaaagaatccAACTGTTGGAGCCTGTCTCTCCCCTCACAGTTCATGTTTTGGAGGTTTACTGTTTCCTCATGCATAATTTTGCCTACTATGTCGCGCTTTTCATGCTTGGAGGAATTAGATTTAAGTTACTGCAATCTCAGTAATGAATCACTTCCTGTTGGTCTTGGCTGCTTATCATCATTGCGCAAGTTAGATCTAAGTgggaataattttgttaaccTCCCAGCTAACTGCATTGCCAATCTTTCAAAGCTATATCATCTAGGATTAGATTGCTGTCCTAGACTCGAGTCGGTGCCTGTTCTTCCTCCACATATTGGATCTCTATATGGAAGAAACTGTGCTTCATGGAAACCATTCTCGGATCCACTATACCTTTGTGATTTTTTCGCGTCACACAAACAGATTTGTTCGGACACATACACATTGGGAGAAGAAGCACCTTTTTTGTTCATTGCAGGGAGTGATATTCCACCATGGTTCACCAATCAAAGCTACTTTCACCTCAGTTTGCCATTTCATTATGAAGTATTTGACCCATTTCAAGATACAATGCAGCCGATGACATTGTTACCTACTCTTTCAAATCAGTTATTGATGTCAATAACAGTGGACATCCCTCAGTATCATCTTTCAAGTGAATGGTGGGGAATTGCTGTATGCCTTGTGTTAGAGAATCCCTTTCCTTATGTTCCCTGGTCTGTAACTCCTATAATCTATTGGATTTGTAAATCTGCTGAAGCTGAATTGCCCAATGCCTCTGCCGAAATTTATATACGCAAGATTGAAGAGTTTAGTGAACCTCATTTGCTTATTTTGTTGTTGAGAGGTAACCATAGAAATATTCAGAGGCATCTAATTAGAGGTGATCATAGCAAGCTTCAATTATCTTTCCATGCTCACTCTTTGCTGAAAATAAGCAAGTGTGGCGGCCGTGTTTTATGTAAGGAAGAACTGGAAGCATGGGCCAAAGCTAGGGACGAACGAAGACATTTCAGCAGTCTCAACAGATCAATAGTAAGAGAGATTGGGAATGTCAATCAATGCTTGGATAGATTTGAGGGAGAATATGTAAATGCATCAAATGCAGAagcaaaacgaagaaaacttGGATA 2492 0.364 MLGREVFPIFYDVDPSDIRYHKGSFGKAFKKHEKRYREDKVKKWRDALGEVAGLSGWHTKNRYHSEIIEKIVAELWTKLQGEVTHLLEICGLYPIIGINVLLEKCLLIEYCDNKKWYLGMHDMLQEMGKNVVIQESINDAGKRSRLWLQEDIDHVLIKNMGSQFIQGIVLESWTHKALWDPKVLESWSYKALRDPKVLESSSHKALWDPKAFSNMCNLKILIFITVDLPLGLDCLSEGLRYLEWRKFPLEELPLDNQLDELVELKMMLSKIKQPWHGIKFFRKLKLIDLSNSEELIRFPSVFGVPCLEQLILEGCINLEEVDQSVGQHKKLMLLNLTNCVNLKILPSKLEMDSLKDFILSGCSKVKKLPEFGDNMKNLSSLDLKDCRSLVCLPNSIHNAKSLRTLNIIGCSKLSRLPENLDGNEALEELNMSGTAIKEVPPSIILLKGLKKLSIGGHKEKESNCWSLSLPSQFMFWRFTVSSCIILPTMSRFSCLEELDLSYCNLSNESLPVGLGCLSSLRKLDLSGNNFVNLPANCIANLSKLYHLGLDCCPRLESVPVLPPHIGSLYGRNCASWKPFSDPLYLCDFFASHKQICSDTYTLGEEAPFLFIAGSDIPPWFTNQSYFHLSLPFHYEVFDPFQDTMQPMTLLPTLSNQLLMSITVDIPQYHLSSEWWGIAVCLVLENPFPYVPWSVTPIIYWICKSAEAELPNASAEIYIRKIEEFSEPHLLILLLRGNHRNIQRHLIRGDHSKLQLSFHAHSLLKISKCGGRVLCKEELEAWAKARDERRHFSSLNRSIVREIGNVNQCLDRFEGEYVNASNAEAKRRKLG 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03243 830 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 355 688 - -
Bva12g03243 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 355 688 IPR044974 GO:0006952
Bva12g03243 830 Gene3D Ribonuclease Inhibitor 373 588 IPR032675 -
Bva12g03243 830 Gene3D Ribonuclease Inhibitor 198 371 IPR032675 -
Bva12g03243 830 Pfam TIR domain 4 84 IPR000157 GO:0007165
Bva12g03243 830 ProSiteProfiles TIR domain profile. 1 79 IPR000157 GO:0007165
Bva12g03243 830 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 76 383 - -
Bva12g03243 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 76 383 IPR044974 GO:0006952
Bva12g03243 830 SUPERFAMILY L domain-like 212 562 - -
Bva12g03243 830 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 57 IPR035897 -
Bva12g03243 830 Gene3D - 1 85 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03243 Bva-Chr12 23312759 23318988 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03243 83 452 WRKY Transcription Factor Family AT4G12020 33.498 1.03e-44 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03243 - - gmx:100799850 540.421