Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03240 ATGGTAGTGAAAATCTTTTGTACAGAGTGGCTAACTTGTTGCTATAGGGGATCCAAGGATCAGGTTGGAACTACTTTTGGACCCGAACCAACTAAAAAAAATCCTTCTGCTGTAAGGGACCAAAATGGCAATTTTTCTGTAGCTTTTAATAAACATGAAGAAAGATATAGAGAGGAGGTTAAAAGATGGAGAGATGCCTTAACAGAAGTTGCCGGTTTATCTGGTTGGCACTCCAAGAATAGGTACCAGTCTGAGCTCACCCAGGAAATTGTAGATGTACTATGGACAAAACTACAAGCTAAATTGCCGACATATGATGATGGATTTATTGGGATGAACTTCGATCAGcCACAATCTAAAAGTCACGAAGGAAGATATAGAGAAGACAAGGTTAAACGATGGAGAGATGCCTTAAAAGAAGTTGCTGGTTTACCTGGATGGCGCTCCAAGGATAGGTATCTGTCTGAGCTCACGGAGGAAATTGTAGCTGTTCTACTTGAGAAGTCCTTGCTAACAAAATATCATGATCACGGTATATTATGTTTGGGGATGCATGATATACTTCAAGAAATGGGTAGGAACATTGTTATTCGTGAATCAATTAATAATGTAGGAAAACGCAGTAGATTGTGGTTGCAAGAGGATATTGATCATgtgttgagaaaaaataagGGATCTGAGTTTATTCAAGGCATAGTTTTAAAGTCTAGGACACAGAAAGCATTGTGGAACCCTAATGCCTTCTCAAAGATATGtaatcttaaattattgatGCTGTTGACAACTATGGATCTTCCGTCAGGTCTTAATTGTCTTTCAGAAGGATTAAGATATCTTGAATGGGAAAATTTTCCTTTAGAAGAACTGCCTCTTCGTGAACAACTTGATGAACTTGTTGAACTTAAAATGTTGCGTAGCAAAATTAAGCAACCTTGGCATGGAAAAAAGTCTTTCAGAAAGCTGAAGCTCATTGATTTAAGATATTCTAAAGAACTCATTCGATTTCCCAATGTTCTCGAGGTTCCAAATCTTGAACAATTGATCCTTGAAGATTGTATAAACCTTTTAGAAGTTGACCATTCTGTTGGACAGCTCAAAAAGCTTATATTACTGAACTTGAAAGGTTGTGTCAACCTTAAAAACCTTCCAAGACATCTAGAAATGGATTCATTGAAGGATTTCATACTTTCAGGTTgctcaaaagttaaaaaacttCCAGAGTTTGgagacaaaatgaaaaatctaacAAGTCTTGATTTACAGGATTGCAAAAGTCTTGTTTGCCTTCCCAAATCCATTGAGAAAGTGAAATCTCTAAGAATTCTCAATATACTTGGttcttctaaattttctaGGTTGCCAGAGAATTTGGGCGAAAATGAGGCCTTGGAAGAGCTTAATGTGAGTGGAACCGCCATAAAGGAAGTACCTCCCTCCATTATTCTCTTAAAAGGtctgaaaaaattatatataggtGGACACAGAGAGAAGGAATCCAACTCTTGGAGCCTATCAACTCTCCCCTCTCGACTGATGTTTTGGAGGTTTCCTATTTCCAGTGCCATAATTTTGCCTCCTTTGTCACACTTTTCATGCTTAGAGGAATTAGATTTAAGTTACATTAATCTCAATAATGAATCACTTCCTGTTGAGCTTGGCTGCTTATCATCGTTGTGGAAGTTAGATCTAAATgggaataattttgttaaccTGCCTGCTAGCTTTGGCAGTCTTCCAAAGCTATATCATTTGGGGTTAGACTGCTGCCCTAAGCTGGAGTCGGTGCCGATCCTTCCTCCACAAATTGGATCTTTAGGTGGAAGAAATTCTGCTTCATGGAAACCATTCTCAGATCCACAATACCTTTGTGATTTTTTCGCGTCACACCAGCAGGTGCGGTCGGCTATATATACATCAAGCCAAGAAGCACCTTTTTTGTTCATTCCTGGGAGTGATATTCCAGCATGGTTCAACAATCAAAACTATTACATGGATTCACCAATTCACGACGAGGTACAAGATATCTTCAAACCCAAGAAATCAGTATCTAGACTTTCAAATCAGTCGTTGACATCAATAATAGTGGACATCCCTCATTACTGTCTTTCAAGTAAATGGTGGGGAATTGCTGTATGCCTTGTGTTAGAGAAGCCCTTTCCTTCTGTTCCCTGGTCTTCAACTCCAGCGTTGCATTGGACTTGTACTTCTGCTAAAGATAGATTGCGTGAGACCAAAGGCACCATGCATGTACGGTCTATTGAAGAGTTTAGTGACCCTcacttgtttcttttattgttgAGAGATGATAAGCATTTAATGTGGGCTATAAGAGGAGGGATGAGCgaagacaaaataataattttgagatccCTTCCAGCAGTCTCAACAGATAAAACGTTCTCTGGAAACTTTGGTCAATgcttttatattgaaaatttgtgtgTTGTCAAACCATCTCAACGGAAGAGATACTCATATTTGACAGATCAAAGTTTCTGGGCCTCGACGGAACCTATTTCACATCAACTCTGTTGTGATCGATTCCCAAGATCGGGTCTAGCTCAGAAGTTGCAGATAAAGCAAGCCAATAATTcgaaaagaaaatcaaccaTTCATCTGTCGCCTGCAAGGAACTTCGACCAGcCACAATCTAAAAAGTATCCTTCGGATGTAACGTACCAAAGTGGGAGTTTCTCTGTGGCTTTTACAAAGCACGAAGGAAGATATAGAGAAGACAAGGTTAAACGATGGAGAGATGCCTTAAAAGAAGTTGCTGGTTTATCTGGATGGCACTCCAAGGATAGGTATCTGTCTGAGCTCACGGAGGAAATTGTAGCTGAAAACGCAGCAGGTTGTGGTTGCAAGAGGATATTGATCatgtgtcaaaaaaaaaataagGGATCTGAATTTATTCAAGGCATAATTTTGAAGTCTTGGACACATAAAGCATTGTGGAGCACAAAAGCCTTCTCAAAGATATGtaatcttaaattattgatGGTGTTAACAACTATGGATATTCCATTGGGTCTTAAATGTCTTTCAGAAGGATTAAGATATCTTGAATGggaaaattttcctttaaaagaACTACCTCTTGATGAACAACTTGATGAACTTGTTGAACTTAAATTGTTGCATAGCAAAGTCAAGCAACCATGGCATGGAACAAAGTCTTTCAGAAAGCTGAAGCTCATTGATTTGAGATATTCTAAAGATCTCATTCGATTTTCCAATGTTCTTGGGGTTCCGTATCTTGAACAATTGCTCCTTGAAGATTGTATAAACCTTTTAGAGGTTGACCAGTCTGTTGGACAGCACAAAAAGCTCATGTTATGGAACTTGAAAGGTTGTGTAAACCTTAAAACCCTTCCTAGAAGACTAGAAATGGATTCATTGAAGGAATTCACCCTTTCAGGTTGCTCAAAAGTTATAAAACTTCCCGAGTTTGGAGACAATATGGAAAATCTGTCAAGTCTGGATTTACAAGATTGTAAAAGTCTTATATGCCTTCCAAATTCCATTCATAATGTGAAATCTCTCAGATTTCTCAATTTAGTAGGTTGTTCTAAATTTTCTAGGCTGCCAGATAATTTGGGAGAAAATGAGGCCTTGGAAGAGCTTAATGTGAGAGGCACTGCCATAAAAGAGGTACCTCAATCGATTactcttctaaaaaaattgaaaagattatCCATAGGTggacataaagaaaaagaatccaaCTCTTGGAGCATCTCAACTGTAGCCTCCCGATTGATGTTTCGGAGGTTTCCTGTTTCCACAGCCATAATTTTGCCTCCTATGTCTCCATTTCAATGCTTGGAGGAATTAGATCTAAGTTACTGTAATCTCAGTAATGAATCGCTTCCTGTTGATCTTGGCTGCTTATCATCATTATGGAAGTTAGATCTACGTGGGAACAATTTTGTTTACCTATCAGCTAGCTGTATTGCCAGTCTTTCAAAGGTATATCATCTAGGGTTAGACAGCTGCCCTAGGCTCGAGTCGGTGCCCGTCCTTCCTCCACAAATTGGATCTTTATATGGAAGAAATTGTGCTTCATGGAAGCCATTCTCAAATCCACAATACCTTTGTGACTTTTTCGCATCACACCAACAAGTACGCTCAGATAAATATACATCTCGCCAAGAAGCACctttttttatggtttcaGGGAGTGATATTCCACAATGGTTCATCAATCAAAGCTACTTTCATTTGGGTTTACCATTTGTTTATGAAGTAATAGGTAAAGTTCAACCTTCGAAATTGCTACCTAGTCTTCCAGTTCAGTCATTGACTTCAATAATAGTGGACATCCCTCATCATTGTCTTTCAAGTGAATGGTGGGGAATTGCTGTATGCCTAGTGTTAAAGAATCCCACTCCGTCTGTTCCCTGGCCTATGACTCCAGCAGTGAGTTGGTATTGTAAATCTGCTGAAGCTGATTTGCGCATCCCCACCAGTGCCAACTATTTGCGCTTGATTGAAGAGTTCAGTGACCCTcacttgcttattttattgttgagaggtgacaataaaattattcagcGGCATCTAATTAGAAGTAATAACAagattcaattatatttttatgctaGCTCTTTGCTGGAAGTAAGCAAGTGTGGGTGCCGTGTGTTATGTAAGGAAGATTTGGAAGCATGGACCAAAGCCAGGGATGAACGAAGACAAGATATCAATGTTGAGATGGACTCGAGGGAGAATATGTA 4733 0.3655 MVVKIFCTEWLTCCYRGSKDQVGTTFGPEPTKKNPSAVRDQNGNFSVAFNKHEERYREEVKRWRDALTEVAGLSGWHSKNRYQSELTQEIVDVLWTKLQAKLPTYDDGFIGMNFDQPQSKSHEGRYREDKVKRWRDALKEVAGLPGWRSKDRYLSELTEEIVAVLLEKSLLTKYHDHGILCLGMHDILQEMGRNIVIRESINNVGKRSRLWLQEDIDHVLRKNKGSEFIQGIVLKSRTQKALWNPNAFSKICNLKLLMLLTTMDLPSGLNCLSEGLRYLEWENFPLEELPLREQLDELVELKMLRSKIKQPWHGKKSFRKLKLIDLRYSKELIRFPNVLEVPNLEQLILEDCINLLEVDHSVGQLKKLILLNLKGCVNLKNLPRHLEMDSLKDFILSGCSKVKKLPEFGDKMKNLTSLDLQDCKSLVCLPKSIEKVKSLRILNILGSSKFSRLPENLGENEALEELNVSGTAIKEVPPSIILLKGLKKLYIGGHREKESNSWSLSTLPSRLMFWRFPISSAIILPPLSHFSCLEELDLSYINLNNESLPVELGCLSSLWKLDLNGNNFVNLPASFGSLPKLYHLGLDCCPKLESVPILPPQIGSLGGRNSASWKPFSDPQYLCDFFASHQQVRSAIYTSSQEAPFLFIPGSDIPAWFNNQNYYMDSPIHDEVQDIFKPKKSVSRLSNQSLTSIIVDIPHYCLSSKWWGIAVCLVLEKPFPSVPWSSTPALHWTCTSAKDRLRETKGTMHVRSIEEFSDPHLFLLLLRDDKHLMWAIRGGMSEDKIIILRSLPAVSTDKTFSGNFGQCFYIENLCVVKPSQRKRYSYLTDQSFWASTEPISHQLCCDRFPRSGLAQKLQIKQANNSKRKSTIHLSPARNFDQPQSKKYPSDVTYQSGSFSVAFTKHEGRYREDKVKRWRDALKEVAGLSGWHSKDRYLSELTEEIVAENAAGCGCKRILIMCQKKNKGSEFIQGIILKSWTHKALWSTKAFSKICNLKLLMVLTTMDIPLGLKCLSEGLRYLEWENFPLKELPLDEQLDELVELKLLHSKVKQPWHGTKSFRKLKLIDLRYSKDLIRFSNVLGVPYLEQLLLEDCINLLEVDQSVGQHKKLMLWNLKGCVNLKTLPRRLEMDSLKEFTLSGCSKVIKLPEFGDNMENLSSLDLQDCKSLICLPNSIHNVKSLRFLNLVGCSKFSRLPDNLGENEALEELNVRGTAIKEVPQSITLLKKLKRLSIGGHKEKESNSWSISTVASRLMFRRFPVSTAIILPPMSPFQCLEELDLSYCNLSNESLPVDLGCLSSLWKLDLRGNNFVYLSASCIASLSKVYHLGLDSCPRLESVPVLPPQIGSLYGRNCASWKPFSNPQYLCDFFASHQQVRSDKYTSRQEAPFFMVSGSDIPQWFINQSYFHLGLPFVYEVIGKVQPSKLLPSLPVQSLTSIIVDIPHHCLSSEWWGIAVCLVLKNPTPSVPWPMTPAVSWYCKSAEADLRIPTSANYLRLIEEFSDPHLLILLLRGDNKIIQRHLIRSNNKIQLYFYASSLLEVSKCGCRVLCKEDLEAWTKARDERRQDINVEMDSRENM 1577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03240 1577 Gene3D Ribonuclease Inhibitor 238 407 IPR032675 -
Bva12g03240 1577 Gene3D Ribonuclease Inhibitor 411 610 IPR032675 -
Bva12g03240 1577 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 968 1161 - -
Bva12g03240 1577 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1156 1458 - -
Bva12g03240 1577 Pfam TIR domain 33 104 IPR000157 GO:0007165
Bva12g03240 1577 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 414 625 - -
Bva12g03240 1577 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 162 420 - -
Bva12g03240 1577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 162 420 IPR044974 GO:0006952
Bva12g03240 1577 SMART LRR_typ_2 1297 1320 IPR003591 -
Bva12g03240 1577 SMART LRR_typ_2 555 578 IPR003591 -
Bva12g03240 1577 Gene3D Ribonuclease Inhibitor 1256 1351 IPR032675 -
Bva12g03240 1577 Gene3D Ribonuclease Inhibitor 983 1254 IPR032675 -
Bva12g03240 1577 Gene3D - 884 952 IPR035897 -
Bva12g03240 1577 SUPERFAMILY L domain-like 987 1343 - -
Bva12g03240 1577 Gene3D - 111 174 IPR035897 -
Bva12g03240 1577 Gene3D - 9 103 IPR035897 -
Bva12g03240 1577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 414 625 IPR044974 GO:0006952
Bva12g03240 1577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1156 1458 IPR044974 GO:0006952
Bva12g03240 1577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 968 1161 IPR044974 GO:0006952
Bva12g03240 1577 SUPERFAMILY L domain-like 184 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03240 Bva-Chr12 23290940 23310053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03240 165 489 WRKY Transcription Factor Family AT4G12020 37.778 3.03e-48 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03240 - - vun:114195147 484.182