Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03199 ATGGCTACAAAACCATCAAATAACATCTGGATTCGACGCCAACAATGCCCATGCGGAGATTGGAAGTGTTTTATCAAGTATGATGGAGATGATCAAATGTTAGTAAGCTCTCAGACCATAAAGAATGAGATGACgccttcatcatcatcaccagAGGCTGTCTTCACTCCTTATGTTGgtcaaatattcaaaagtgaCAATGATGCTTTTGAATACTATAGCAATTTTGCCCGGAAGAATGGATTTTCAATCAGGAAAGCACGCTCAACAGAAAGTCAAAATTTAGGAATATATAGACGAGATTTTGTTTGTTACAGGTCAGGATTCAATCAACCAAGGAAAAAAGCCAATGTGGAGCATCACAGGGAGCGGAAATCAGTAAGATGTGGATGTGATGCAAAATTGTACTTGACAAAGGAAATTGTTGATGGTGGTATCCAATGGTATGTCTCTCAGTTTAGTAATGTCCATAACCATGAGTTGTTGGAAGATGACCAAGTGCGTCTTCTTCCTGCTTATCGAAAAATACAAGAGGCTGATCAAGAACGCATTCTTCTACTTTCCAAAGCTGGGTTTCCTGTAAACCGTATTGTGAAGGTGTTAGAACTGGAAAAAGGAGTTCAACCCGGACAACTTCCTTTCATAGAGAAGGATGTCAGAAATTTTGTTCGGACATGCAAGAAGACAGTTCAAGAAAATGATGCTTTACTCactgaaaaaagagagaacgATATGCAAGAACTTGTTGAGGCTTGTAAGGCAATGACAGACAAGGATGCTGATTTTACATATGATTATACTACAGACGAAAATGGTAAAGTTGAAAATATAGCTTGGTCATGTGGTGAATCAGTTCGCGCATATACAGTTTTTGGCGATGTAGTTACTTTTGACACCACATACCGTTCTATCACCTATGGGTTGCTTCTCGGAGTGTGGCTTGGCGTTGATAATTACGGCAATGCTATATTGTTTGGGTGTGTTTTGTTACAAGATGAAAGTTCTAATTCATTTGCATGGGCCTTACAGACTTTCGTTCGATTTATGAGAGGGAGATATCCAGAGACAATTTTAACTGATATTGATCCAGGTCTCGGAGATGCTATAGCTAGGGAGTTCTCTAACACGAAACATGTTATATGCACGTGGCATATTCTATCAAAATTATCAAGTTGGTTCTCTATTCTTCTGGGATCAAAGTATTCCGATTTTAGGTCAGAATTTGATATATTGTGTGACCTGGAGagcatagaaaattttgaacacCAATGGGATCCTTTTGTTGCTCGATTTGGACTTGTCTCGGATAAGCACATTGCTTTGTTGTCCTCATTTCGAGCATCCTGGCCCGTAGCCTACAttagaagttattttgtaGCCCGTTCGTTGACAGCTGAGTTTTCACAGTCTATAGATTCATTcttcaaaagaattttaaatggaCAAACATGTTTACATGGATTCTTTGAGCAGATTGGTCTTGCTGCCAACTTCACAAAGGCAAACAAAGCAGGGATGCATTTCATGCCTCTCAAAACATGCATGCCTATTGAAGAACATGCAAGGAGCATTCTTACACCCTATGCTTTCAACGTGTTACAGCGCGAAATCATGCTCTCGATGCAGTACGCGATGACAGAATTGGCGAATGGATCGTATCTTGTTCAACACTACAAGAAAATGGACACTGAACGCCTCGTGATATGGATGTCAGATAACGAGCAGATTCATTGTTCTTGTAAGGAATTTGAGCATTCAGGTATACTTTGCAGACACGCCATTCGTCTACTTGTACTGAAAAACTACTTCCAACTGcctcaaaaatatttactacTTCGCTGGCAACGAGAAAGCTCCATAGCTCCAATTGATGATCAAAATCCTCAAAGCAGTGATGAATGTGCTCAAGCTTTCCATTCTGTTGCAGAAAATTTACTGACAGAGTCGTTGATCTCTCAAGAACGATTTAACTATGTTCATAGAGAGCTTACTGGGATTCTTGAGCAGGTAAAAAATATGCCAGTTATTGATGAATTTGCTGTGAATGTAGCAGCTAATAATGTTAGTGAATCTTA 2075 0.374 MATKPSNNIWIRRQQCPCGDWKCFIKYDGDDQMLVSSQTIKNEMTPSSSSPEAVFTPYVGQIFKSDNDAFEYYSNFARKNGFSIRKARSTESQNLGIYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGGIQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDMQELVEACKAMTDKDADFTYDYTTDENGKVENIAWSCGESVRAYTVFGDVVTFDTTYRSITYGLLLGVWLGVDNYGNAILFGCVLLQDESSNSFAWALQTFVRFMRGRYPETILTDIDPGLGDAIAREFSNTKHVICTWHILSKLSSWFSILLGSKYSDFRSEFDILCDLESIENFEHQWDPFVARFGLVSDKHIALLSSFRASWPVAYIRSYFVARSLTAEFSQSIDSFFKRILNGQTCLHGFFEQIGLAANFTKANKAGMHFMPLKTCMPIEEHARSILTPYAFNVLQREIMLSMQYAMTELANGSYLVQHYKKMDTERLVIWMSDNEQIHCSCKEFEHSGILCRHAIRLLVLKNYFQLPQKYLLLRWQRESSIAPIDDQNPQSSDECAQAFHSVAENLLTESLISQERFNYVHRELTGILEQVKNMPVIDEFAVNVAANNVSES 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03199 691 SMART 26again6 576 603 IPR006564 GO:0008270
Bva12g03199 691 ProSiteProfiles Zinc finger SWIM-type profile. 566 601 IPR007527 GO:0008270
Bva12g03199 691 Pfam SWIM zinc finger 571 597 IPR007527 GO:0008270
Bva12g03199 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 34 672 - -
Bva12g03199 691 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Bva12g03199 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 672 IPR031052 GO:0006355
Bva12g03199 691 Pfam MULE transposase domain 294 387 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03199 Bva-Chr12 22964014 22968634 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva12g03199 MULE 8.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03199 - - pvy:116123071 1141.72