Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03195 ATGTCTTCCTCATCTTctgcttcatcatcatcatcgtcatcttcaacttcaacCGATGACATTGGCAATGGTGTTGCTGCTCCTGGCCCTAGCACCAGGAGAACCTCTGATTTTGAAGGCCCTTCTTCTTCTCGTCTACGTGCCATGAATGAGGTTTGGCCTGCGCCATTTTTGGAAGCTTTGGCCACCCAAGTCGCCATTGAAGCTGCTCAATCTCAAGGGCGTCTCTTTGTTGCTCCTGCACTTGCCAATGTGTTTCAGGTTTGTTCTACATGGCGAGCTGCCTCGCGCTCTGATCCCCTGTGGCAGCGGCTCACTGAACACATCTGGCGTAGGACCCACTTAATACGTGACACGTGGCATGATGAGTTCATCTACTGGCATCGAGCGGCTGCGAATTTCCACCGAGGCAACTCCTCCTACACCACCCTACACTTCGATCCCTCCGACACTGACGGTGATCCTGATAGCCTAACTTGCCGGTGCCTTACCCTCTCCGACCACTACCTCGCTTGTGGTTTCGCCGACGGGACCGTGAGACTCTTCGACCTCGGCACCGGCTTCCACGTCAGCACCTTTCGTTCTCACCTCCGCAACCGTCTTGGTCGATTTTCTCGGGCAGTATCCGGCATCATAATGACCGGCACCCAGCTAGTGTTTGCCTCGTTGGATGGGGATATCTGTGTGGCAATATTAGATGGACCAGCTCAGCATCCTCGTAGGGCCCGCACTGGCGACGTGGTCACCAACGGGGCGTTAGTAGAATTCGCCGGATGCAGGCGACGGTGGGTCGGGCTATTCGCCGGAGTTCCGGGTCGGGCCATCCACATATGGGACGCACAGACAGAAGAACCCGTTTTCATTGGCGGAACCTTGACCGACCCGGAAGCGGTTATGGGTTGGCACATGCTGACCGAGGTAACCGACCCGGTGGGTCGCCTCCGAGTGACAACCCAAGAAACAGCCGTTGCCTGCACCAGCTCGAGGCTCATAGTGTTTGACCTGGCAAACCCAGACCCGGAAAACATAGGGTTTTTATTGCATGAGCTAGAGCCCACCACAGGCTTCATAGTGACCTCGCTCGACGTCAGCCACAATGCGTTCATTATCGTAGACAACTTCGGTTGGGCTACAGTGCGCCGGGCGAGCACGTTAGAATTCCTCTGCCGCAGATTTTCGACTCGAAGCCCAAACGCAGGTGCATCCACATCAACCCCGATAAGGACCAAGTTCATGGCCTGCATGAATCTAGGGCACGCACTAACGACCACGGGGGGCGTAATACGCGTATGGGAAGTAGAACACGGCGCCTACCTCTATAGGCTCAATCGGGACAGAATAAGCGAGCCAAACGCTATGGTGGCAAACGAGAGACACGTGGCAATCGCAAGCAGCGACACGTCGATACACCTATGGGATTTCGGTGTACAGTA 1433 0.5422 MSSSSSASSSSSSSSTSTDDIGNGVAAPGPSTRRTSDFEGPSSSRLRAMNEVWPAPFLEALATQVAIEAAQSQGRLFVAPALANVFQVCSTWRAASRSDPLWQRLTEHIWRRTHLIRDTWHDEFIYWHRAAANFHRGNSSYTTLHFDPSDTDGDPDSLTCRCLTLSDHYLACGFADGTVRLFDLGTGFHVSTFRSHLRNRLGRFSRAVSGIIMTGTQLVFASLDGDICVAILDGPAQHPRRARTGDVVTNGALVEFAGCRRRWVGLFAGVPGRAIHIWDAQTEEPVFIGGTLTDPEAVMGWHMLTEVTDPVGRLRVTTQETAVACTSSRLIVFDLANPDPENIGFLLHELEPTTGFIVTSLDVSHNAFIIVDNFGWATVRRASTLEFLCRRFSTRSPNAGASTSTPIRTKFMACMNLGHALTTTGGVIRVWEVEHGAYLYRLNRDRISEPNAMVANERHVAIASSDTSIHLWDFGVQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03195 477 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 8 477 - -
Bva12g03195 477 MobiDBLite consensus disorder prediction 1 43 - -
Bva12g03195 477 Gene3D - 152 250 IPR015943 GO:0005515
Bva12g03195 477 Gene3D - 262 477 IPR015943 GO:0005515
Bva12g03195 477 SUPERFAMILY WD40 repeat-like 153 471 IPR036322 GO:0005515
Bva12g03195 477 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g03195 477 PANTHER WD40 REPEAT PROTEIN 12, 37 8 477 - -
Bva12g03195 477 SUPERFAMILY F-box domain 82 168 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03195 Bva-Chr12 22905487 22911322 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Bva12g03195 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03195 - - pxb:103935441 537.724