Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03191 ATGGAAGGTAAAGAAGCGGCTCTTAAAGCTATAGAGAATGCTGAGAAGCGATTTGTTCTGAGAGACTTTGTTGGTGCAAGAAATTATGCATTGAAGGCTAAAGTGCTATTCCCAGGATTGGAGGGTTTATCTCAAATGTTGACTACATTTGAAGTTTACATTGCTTCTGAGAGTAAATGTAATGGTGAAATAGATTACTATTCAGTTCTTGGATTAAAACCTTCTGCTGATAAAAATGCTGTCAAGAAACAGTACAAGAAGATGGCAGTATTGCTTCACCCAGATAAAAACAAATGCGTGGGAGCTGATGGGGCATTTAAGCTTGTATCTGAGGCATGGACTTGGCTATCAGATGGTGCTAAGCGAAGTTCTTATGATCTCAAGAGAAATGGACAGATGGCTGCTGGGATTAATCAGACAAATTCGTCTTCAGTCCATGCTTCAGGGGTTACAGGTTATAATGACTGTTCCAATTTGTCGACTTCTCATAGTAGGCTTGACACTTTTTGGACCATTTGCACCTCCTGTAAAGTTCAGTATGAGTACCTGCGGAAGTACGTGAAGAAGAGACTTTCATGTAAGAACTGCCGTGGCACTTTCATTGCTGTTGAAACTGGGGCACCCCCAGCAAGTGGTTCATTCCCGTATTGTCCTTGGTCATTTAATGGGTATGGAAGTCGTTCATTTGATGGAGTTTCATATGTCCCAAGTAGCACTGCCTATTTCAATGGCAATGGTGTCACAGGTTACCATTCTGGACATGGATATGAGTATGTTCCAAATGTTTCATTTCAGTGGAGCTCAATATCTGGAACTTCTGCAGGACATATCAGTCAAAATGGATCAACTACCTTATCTTCTGATTCTGTTCATCATTCCAATGGAAGCGTTAAGAGAGGCAGACCAAAGGTCAAATCAGGAGTAGATAAGAGGCATCATGAGACAGAGACTGTGATCAATCTGCATTCAGATGTtgtatcattttcttctaatgAACCACAGGAAATAAAGCCCCCTAAACCAGATAAGAGAAGGAAAGTTGTTGTGGGAGCCAGTTTCAGAAATGGCAATGAAGAAAAGGGATCAAGATCTGCTCCGGAGTCAGGCTTGGCAAATGGGAATGCAAGTATTGGACCTGCACAAAAGCCTTCATGCCCAAATGAAGTTCAAACTAAACAGTGTTCTATGGCACCAGCATTTGATGCTAGAAAACTATTGATTGAGAAGGCCAGGACCGAAATTAGGAAGAAACTGGAAGAGATGAAATTGGCCTCTGAaactgctgctgctgctgctaaggagaaagaaaaagtgcaAGCTGATAATGGTCCAGTCAAAAGAGAGGCATATAGAAGAACAGGTTTAGATGGTTCTCAGCAATTAGAGCATAGGAAAACTGGTCCAGTCTCAATAAATGTTCCAGATCCTGACTTTCATGACTTTGATAAAGACAGGTCAGAGGAATGCTTTAAGCCAAAGCAAATATGGGCTATATATGATGAGGAGGATGGAATGCCTCGTTTGTACTGTCTTATCCGCGAGATTATCTCTGTCAATCCATTCAAGATTCATATTAGTTACTTGAACTCCAAAACAGATAGTGAGTTTGGCTCTGTCAACTGGCTAGATTCAGGTTTTACTAAATCTTGTGGAAATTTCAGGGCATCGATCTCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGTTTTAAGCCAAGAGAAGGCCGGTCGAGGTGGTTGTGTTCGAATATATCCCAGAAGTGGGGACATTTGGGCTGTTTATCGAAATTGGTCACCAGACTGGGACAGGTCTACACCAGATGAGGTGAGGCATCGGTATGAAATGGTAGCAGTACTTGATGATTACTCTGAAGAGCTTGGTGTCTGTGTTGCTCCACTTATCAAGTTGGCTGGATTTAAAACAGTGTATAAGAGTAATAGAGACAAAGGTGCCATTAGATGGataccaagaagagagatgcTGCGGTTTTCGCACCAAGTGCCATCTTGGTTGCTGAAAGGAGAGGCAAGCAATTTGCCTGACAAGTGTTGGGATCTCGATCCGGCTGCGACTCCAGATGAGCTTCTTCATGCTTCTGCAGAAGCAAATGCTTTGTA 2120 0.4057 MEGKEAALKAIENAEKRFVLRDFVGARNYALKAKVLFPGLEGLSQMLTTFEVYIASESKCNGEIDYYSVLGLKPSADKNAVKKQYKKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDGAKRSSYDLKRNGQMAAGINQTNSSSVHASGVTGYNDCSNLSTSHSRLDTFWTICTSCKVQYEYLRKYVKKRLSCKNCRGTFIAVETGAPPASGSFPYCPWSFNGYGSRSFDGVSYVPSSTAYFNGNGVTGYHSGHGYEYVPNVSFQWSSISGTSAGHISQNGSTTLSSDSVHHSNGSVKRGRPKVKSGVDKRHHETETVINLHSDVVSFSSNEPQEIKPPKPDKRRKVVVGASFRNGNEEKGSRSAPESGLANGNASIGPAQKPSCPNEVQTKQCSMAPAFDARKLLIEKARTEIRKKLEEMKLASETAAAAAKEKEKVQADNGPVKREAYRRTGLDGSQQLEHRKTGPVSINVPDPDFHDFDKDRSEECFKPKQIWAIYDEEDGMPRLYCLIREIISVNPFKIHISYLNSKTDSEFGSVNWLDSGFTKSCGNFRASISDVVDQVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPDWDRSTPDEVRHRYEMVAVLDDYSEELGVCVAPLIKLAGFKTVYKSNRDKGAIRWIPRREMLRFSHQVPSWLLKGEASNLPDKCWDLDPAATPDELLHASAEANAL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03191 706 Coils Coil 407 427 - -
Bva12g03191 706 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Bva12g03191 706 MobiDBLite consensus disorder prediction 275 390 - -
Bva12g03191 706 PANTHER BNAC03G44070D PROTEIN 4 699 - -
Bva12g03191 706 SMART dnaj_3 64 121 IPR001623 -
Bva12g03191 706 MobiDBLite consensus disorder prediction 367 390 - -
Bva12g03191 706 PRINTS DnaJ domain signature 101 121 IPR001623 -
Bva12g03191 706 PRINTS DnaJ domain signature 67 85 IPR001623 -
Bva12g03191 706 PRINTS DnaJ domain signature 85 100 IPR001623 -
Bva12g03191 706 MobiDBLite consensus disorder prediction 320 334 - -
Bva12g03191 706 Pfam DnaJ domain 65 126 IPR001623 -
Bva12g03191 706 PANTHER BNAC03G44070D PROTEIN 4 699 - -
Bva12g03191 706 Gene3D DnaJ domain 53 150 IPR036869 -
Bva12g03191 706 CDD DnaJ 65 118 IPR001623 -
Bva12g03191 706 MobiDBLite consensus disorder prediction 275 293 - -
Bva12g03191 706 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Bva12g03191 706 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03191 Bva-Chr12 22860654 22864297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03191 14 303 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.747 1.56e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03191 - - gmx:100788692 1138.25