Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03188 ATGTTCCAAGCAAGGAATTTCACAGCTTGTGATGATCATAATGGTGCTGACATTGCTCGGCAATGGCGAAAATTGTACATAGTAATATCAATCACTCTGAGGATTCCAACCTCAGCAAAAAGTCAATGTCCACCTTTTCCGCCATCGCCGTTGACTTCAGTAGACTACACTCCGTTACCCTCAACACCACCTTCTAGGTCCTCCTCTGCTAAATCCTATTGTGCAATTGATGTTGACTCAGACCACCTAGAAGAGAACGGGGTTGCCGGACAAGAGTGCTTTAAGAATCGCATTGCTCAAATTGTGAAAGAGAAGGACTTGAAATCACTTCGTGAGCTCGGTGGAGTTGCCGGAGTTTGCTCGCGACTTGGTCCTCCTCTCCCTTCAGAGGTGGGTACTATTGGTAATTCAAACCCACAAGTGTTAGAGACCAAAACTAGCTTCTTATACTTGCTATGGCATAGTTGTCAACGCAATAGACGCATAATTTTCTGGCTCTTGGTCTCTGCCGGACTGTCTTTTGCCACAGAGATGAAGCAGGAAGGACCTCAATCTGGTTGGCATGATGGTGTTGCAATAGTTGTTGCTGTTATCATGCTTGTTGCATTCCCTTCAGTGACAATCTTGTGGCGTCAAAGGAAGATGGTGAAATTGTTGAAAAACAAGAAGTTGGAAGTCACCATTTTGAGAGGTGAAGAACCTCAAAAGGTTGCCATTTCTGACATAGTGGTGGGTGATAGAATTTGTCTACAGAAAGGCGATGAGGTTCCAGCTGATGGTTTGCTTATAAGTGGTACTGGCTTTGTAGTAGACGAGGTACTTAGCCCCAAAATTGATAGTGTTAGGAACCCATTTCTCTTGTCTGGTTCAAAAGTGATTGAGGGTGAAGGTCGCATGCTCGTAACATCAGTCAGAGACAAAACAACTCAAGCTGAGAGGCAGAGCTTAATAACTCATGattctgaaaagaaaaagctgtTGGAAAGTCAGATTGAGAAGCCAATTTCTTACATTGACTATCTTGCTCTTTTAATCTCTGTAGTTGTTTCTATTGTGGTGCTCATTCGCTTACTCAGCAAGCAAGATGGGGAAAATGATGGGTTACCAGAAATGAAGGGGAATCTTACAGTTGATTCCTTGATAAAAATCCTCGAAAGAATTTTCTTCAGACCGAAAGGAAAGATTTCCATTTTAACAAGCATCCTTGCAGTTGTAGCAATAAGTATGCAACATGGAATGCCAGTTACAGTTTTAATTTCCCTCAAATACCAAATAGATAAGCTGGCGTTAAACCAAGATGCAAATTTTCAGGATTTATCAGCATCTGCAACAATGGGGTTGGTTACTGTCATCTGCATTGATGCATCTAGTGAGCTAATTGGTAAGGAGGAGGTTAGCAGGGCGTGCATGGGAGAGAAAGATATTGGCAACGATGTGAGATTTGAAGTTAATGGagtttttcttgaagaacTTAAGCAAGGAATTGAGGCATATATTCTTGCTTCAGAGCTTTCTCTTGCCCCAATGTCCAATTCAGTTGTTTCTTGGGCAGAAACTGCATTGGACATGAACATAGAGTCCCTTGACAAAAGATTTACCATTCTTAAGCACGGCGAGTTGAATTCTCCGAGAAAAGGCACTGGAATTTTGGTGGAAAAAGTTGGGAACAATGATCAAGTTTTGCACTTGCACTGGAATGGGGCAGCATCCACAATATTGGACATGTGTTCTCACTGCTATAACAGCAAAGGGCAACGTGATGCCATGGAAAACCACAGAAGTAAACTGGATCAGTTAGTTAATGATATGAAGGATAGTGGGCTCAGGCCAATTGCATTTGCCTATAGACAAACGGGAGTGCAAGAACTTGAACAAAATGGTTTGGTCCTGCTAGCACTGATAGGTCTCAAATACACGTGCCTGGAAGAGACAAAGCAAGCCTTGGGAAAACTTAAAGATGCTGGAATAAAGATCAAATTGGTATCACACAATGACATTATGGAAGTGAGAGACATAGCTCGTGATCTCGGAATATTAGAACAGGTAGAAGATGATTCGGTGCTTGAAGGAGAAGGACTTCGAGATTTGACTGACACTACTAGATTGGACAAGGTGAATCTAGCTGTTGTAATGGGAAGTTTTCTCCCTAAAGACAAGCTTCTCATGGTGCAGTGCTTGAAAACAATAGGTCATGTTGTTGCAGTCTTTGGAGGATTGACAACAAGTGATAATCCAGTTCTACAGGAAGTTGATGTAGGAATAGTTGAAAGTTCCCGGAGCACAAAAATGACCAAAGACAACTCGGGCATACATATCAAACATTTCAGTGCACTAATCCAAATAGTGAAGGGTGGTAGATGTATATATCAGAATATCCAGAAGTTCACTCAACTTCAGCTCACAGCTTGCCTATCTAGTTTGCTAGTAACCTTGATTACAGCTATATCTACTGGAGAATCGCCCTTGACAGCAATTCAATTGATTTGGGTGAATGTGTCAATGTGCTTCATGGGTGGTCCAATGATGGTGATGGAGTTAAACGGCGAGAAACAGCGCGCTAATCAACCATCTTACAGGAAGCAGTCATTTATAACCAAAGAATTCTGCAGGGATGTGGTTATTCAGGTTCTGTACCAGGTTTCTGTATCCATGATTCTTCAATTTGGGGACATAGTCCCAGATTCCACAAAACAAGCCCAGAAAACTATGATCTTCAACACATTCATGCTATGTCAAATCTTCAATATTCTTCGTACCATGTCTCTATTTGAGAAAGGAGTTTTCAGGGTTGTTCTTCAGAGCTACTGCTTCTTGGTGGCTTTAGGGGCTTGTTTGGTAATCCAGGTGCTGCTGATTCAGTATGCAGGAGGCCTAGCAGCAGGTTGCATGCAGCTGAATGCTATTCAGTGGGCAATCTGCATCCTGGTTAGTGCTCTTTCATGGGGATTGCATTGGCCGGTGAAGTTTCTTCTAGATATTCTCATGGCCTACTTTGATTCAATATCAATTAACACATCCTCTAGTTTCTCTAGCTCACCCAGTTGGTACTTTATTCCTTGCTTGTGGTTTCCATTTCTGAtgctcattttcttccatgttCCTCCTTATCACATTGACCCAATTGGCAAGACACTTTG 3137 0.4154 MFQARNFTACDDHNGADIARQWRKLYIVISITLRIPTSAKSQCPPFPPSPLTSVDYTPLPSTPPSRSSSAKSYCAIDVDSDHLEENGVAGQECFKNRIAQIVKEKDLKSLRELGGVAGVCSRLGPPLPSEVGTIGNSNPQVLETKTSFLYLLWHSCQRNRRIIFWLLVSAGLSFATEMKQEGPQSGWHDGVAIVVAVIMLVAFPSVTILWRQRKMVKLLKNKKLEVTILRGEEPQKVAISDIVVGDRICLQKGDEVPADGLLISGTGFVVDEVLSPKIDSVRNPFLLSGSKVIEGEGRMLVTSVRDKTTQAERQSLITHDSEKKKLLESQIEKPISYIDYLALLISVVVSIVVLIRLLSKQDGENDGLPEMKGNLTVDSLIKILERIFFRPKGKISILTSILAVVAISMQHGMPVTVLISLKYQIDKLALNQDANFQDLSASATMGLVTVICIDASSELIGKEEVSRACMGEKDIGNDVRFEVNGVFLEELKQGIEAYILASELSLAPMSNSVVSWAETALDMNIESLDKRFTILKHGELNSPRKGTGILVEKVGNNDQVLHLHWNGAASTILDMCSHCYNSKGQRDAMENHRSKLDQLVNDMKDSGLRPIAFAYRQTGVQELEQNGLVLLALIGLKYTCLEETKQALGKLKDAGIKIKLVSHNDIMEVRDIARDLGILEQVEDDSVLEGEGLRDLTDTTRLDKVNLAVVMGSFLPKDKLLMVQCLKTIGHVVAVFGGLTTSDNPVLQEVDVGIVESSRSTKMTKDNSGIHIKHFSALIQIVKGGRCIYQNIQKFTQLQLTACLSSLLVTLITAISTGESPLTAIQLIWVNVSMCFMGGPMMVMELNGEKQRANQPSYRKQSFITKEFCRDVVIQVLYQVSVSMILQFGDIVPDSTKQAQKTMIFNTFMLCQIFNILRTMSLFEKGVFRVVLQSYCFLVALGACLVIQVLLIQYAGGLAAGCMQLNAIQWAICILVSALSWGLHWPVKFLLDILMAYFDSISINTSSSFSSSPSWYFIPCLWFPFLMLIFFHVPPYHIDPIGKTL 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03188 1045 Gene3D - 772 891 - -
Bva12g03188 1045 Gene3D - 892 998 - -
Bva12g03188 1045 Pfam Cation transporting ATPase, C-terminus 820 989 IPR006068 -
Bva12g03188 1045 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 518 636 IPR023299 GO:0000166
Bva12g03188 1045 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 992 IPR023298 -
Bva12g03188 1045 Pfam E1-E2 ATPase 224 428 - -
Bva12g03188 1045 PANTHER CATION TRANSPORTING ATPASE 86 1005 - -
Bva12g03188 1045 Gene3D - 633 771 IPR023214 -
Bva12g03188 1045 SUPERFAMILY Calcium ATPase, transduction domain A 225 316 IPR008250 -
Bva12g03188 1045 Gene3D - 154 448 - -
Bva12g03188 1045 MobiDBLite consensus disorder prediction 51 70 - -
Bva12g03188 1045 MobiDBLite consensus disorder prediction 55 70 - -
Bva12g03188 1045 SUPERFAMILY HAD-like 628 775 IPR036412 -
Bva12g03188 1045 Gene3D - 490 632 IPR023299 GO:0000166
Bva12g03188 1045 Gene3D - 144 318 - -
Bva12g03188 1045 PANTHER CATION-TRANSPORTING ATPASE PLANT 86 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03188 Bva-Chr12 22829161 22832994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03188 20 990 Primary Pumps ATPases AT3G63380 32.315 1.38e-145 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03188 K01537 - gmx:102661547 837.41