Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03184 ATGACAGCGGTAGGAGAAGGGTTTGCTGCCAGTCTTGCATCTGAGGCTTCAAAGGGCCTCTTCCTCCTTGCAAAACGTCATGCTGGTTATTGCTTTCACTTCAAAAGGTATGTTGAAGAGTTTCAAACAAAACTGAAGAACTTAGAATCCACAGAAAATGATGCACTAGAACGTGAAAGAAGCGCAAAGGAAAATAATGAAGAGATCACCGATGTTGCAAAGAATTGGTTGGGCAAAGCCAAGGATCTCATAGATGCTGCAGAGGAGctaaagaagaagatagaaaAACCGAGCATGTGTGCGATCGGGTGGTGTCCCAATTGTATTCGTCGACATGGTTTAGGAAAGAAGGCAGCAGAAATTATCTTGGAACTGAACAAACACAATATAGATTTCAAATCTGATCATTTTTCACGCCCTGCTCCTCCTTTGGGCATGGAATTTCATGctcatataaatttcattgatttgGAGAGTAGAAAAGTGGCCTATGATGAACTTTGGATGGCATTGCAAGATGAAGAGAAGATGAGAATTGGAGTGTATGCAATGGGGGGTTCAGGAAAAACCACCTTGGTAAAAGAATTGGGTTATaaagcagagaaagaaaagttgtTTCATAAAGTTGCTTTTGTTATTGTCTCAAATACTCTAGATGTAAGAAGGATTCAAGAAAACATTGCAAGCCAATTGGGGCTAACATTTAGATTCAGCCAAGAATCTGACAGAGCGAAAGAATTGTGGTCGAGAATGACAAACGGGGACAAGATTCTCATAATCTTTGATGATGTCTGGGAAAAActtgatttcaaatatattgGGATTCCATTTGATGAAAAGCACAAGAGTTGCAAGGTCCTATTCACTACTCGTAGTGTTGGTGTTTGCACTTCCATGGAATGCCAATTAAATATTCAACTGTCAGTTTTAACAGAGGAGGACTCATGGAAGCTATTTCAAAAGTatgcaaatataaataatgatcCTTCTGTACCGTTGTATGTGGCCAAGGAAATTGCAAGAGAATGCAAAGGGTTACCGGTAGCTATTGCAAGTTTAGCAAGCACGTTAAAGGACAATGAACCTCAAGAGTGGGAGTATGCTTTGAGCACCTTGAAAAATTCTGAACCATTGATTGGTATTGATGAGCATCTAATAGAAATTTATAGTTGTTTGAGGTTAAGCTATGCTAACCTGAAGAGTAGGGAAGCACAGGAACTGTTCTTGTTATGTTCCTTTTTCCCGGAAGATGATGAGATTCCTGTGGAGGATTTAACAAGATATGCCATAGGATTGCATCTATTCGGACATGATTGTTCCATCATGAAGGCAAGGAGGCTGACACTTAAAGCTAAAAAGACACTTACCGATTCTTGTTTGTTATTGAATGTTGAATCAGGTGAAGAATGTGTTAAGATGCATGATTTAATTCGTGAGGTGGCCCAATGGATAGCTAATAAAGAAATCAAGGAGATTACAGGGTCCAAAATTGATGAAGACGCATTAGATAGAACAAGATACTTATGGTTCCATGTGAATAATGATCTTCTCAATCAACTGAATTACCCTAAACTTGAGGTTCTAATGATTTCTGTAGAAATCGGACAAAATATTTCCCTTAAAATGAAGGAAGGATTTTTCAGAGGTTTGCATAACCTtcgtgtttttattttaaaaatgacattGAGGCTGGTCTCAATTAAACTTCCACAGTCAATCCAATTTTTGAAAGGACTTCGAATTCTTTGTCTAGATGGATTGAAATTAAGCAACATCTCTATTATAGGAAGTCTAAAGAGCCTTGAGAGCTTTGAATTGCGTAATTGTGAAATTGATGAATTGCCTAGTGAAATGGTGGAGCTAAACAATTTGAGATTGTTAGACTTGTCAAATTGTACAATTTTACAAAACCCTTTTGAAGTAATTGGGAGATTTATGCAATTAGAAGAACTTTATTACTTCACAGAATTCTTGTCAGTAGGTTGGAAGATTGATGGTGagaatatttctaatttttttggtgaaaattgCCGATTGACAAATTTGGCAAGGTATCGTATACAAATAGGAAATTTAGACGACAAATTGGGTGAACAATTGATACCTCGAGGCCTATCTATTGATTGTTTTCATCCTTTCACTTCAAATGCAACACTTAAAAGTTTAGTGAGAAGAGCAGAGTATCtttctttgaataaaattaaaggtgGATACAAAAACATTGTACCAGATGTAGTTCAAGCAGTAGGAGGAAAGATTCAATGGACTAAGCTTCGCGTTCGTTCTTGTGTTGACATTGAGTGCCTCATTGATGCTTCCAATGTTTCATCTCAGGATGCTGGTATGCTCACTGCATTGATTGAGCTCCAAGTTTCCTCAATGGATAATTTGAAAGAAGTTTGTCGTGGTACACCTCCTTCCGgctttttagaaaaattagaaaagctACATGTAGATAGCTGCAACCAATTGCATAGCATATTATTTGTGGGAAGACTAAACCTTCGCAACCTAAAGGCTGTAGAAGTGAGGCATTGTTTGATGTTAACATCTCTCTTTACACTATCTGTAGCTCTTAGTTTGGAACTACTCGAAAAATTGTATGTGTATTCGTGCAGTGGACTGAAGTACATAATAGCAGATGAAAGAGGGTGTGAAAAGGATGTTTTCAACCAGGAGATAAGTTATACATCTATTTTCTCAAAACTAAAATCATTGGTGATTTTGAATTGTGAgaatttggaatttattttccCAGTTTGTCTTGCAAGAAGACTAGTACTGCTAGAAGAAATCCAAATTAAGGATGCTGCTAAGCTGAAATACATATTTGGGCAATTCCAAGACGAAGGTGGGTCTTTGCATAAGAATGACAAGGAGATCATGCTTCCATCGTTgcagaaaataatattgtggGATATACCTAATTTTAATAGCATTTTTCCTATGCATTGTCACTTAAAAGACTTTCCTGAAATGGAGGCCACCCGCTTGGAAGCTACAACCCCAAAGGCATTACATTCATCACAAAATCATGACACAACATGGTATACATCTGCAGTTCAATGTCTTCCAAGGAAATTATTAGTACATTGTTTCCAAATGGAAGCTACTGCCTTGGATACCACGACCTCAAAGGATGCAAGTATACTCTCTACATCGGTTGAGCTAAAAGTTTCTTTGATGGataatttgaaagaattatGTGACAGTACACCTCCTTCAGgcattttggaaaaattagaaaagctAATTGTAATAGGATGCTACCAATTGCGTAGCATATCATTTGGGGGCAACCTAAACCTGTGCAGTCTAAAGGATGTAAAAGTGGAAAGCTGTTCAGTGTTGACATCTCTCTTTACAGTGTCTGTGGCTCTTAGTTTGGTGCAGCTTGAAAAATTGCATATATCTGCATGCAAGGGACTAGAATACATAATAGCAGATGAAAAAGAGtggaaaaatgataattacaaTGCGAAGATAAGTTCTGGATCTATTTTCCAGAAACTAAAATCTGTGGAAATTGATGAATGTGAGAGTTTGGAATTTATATTCCCTGTGTGTCTTGCTGGAAAACTCGTACGACTAGAATTAATCCGAATAAAGTGTGCTGCAAAGCTGAAACACATATTTGGGGAATTCCAAAATGAAGGTAAAGGTAAGCCTTTTCTTCAGAATGGCGAGATGATGCTTCCATCATTGGAGAAAATAGTAATGAATGAAATACCAAATTTCAATAGCATCTTTCCTATGTATTGTAACCCAAAAGACTGTACAGAAGTGGAGGCAATCAGCTTGGAAGCCACAACCACTATGgAATTACAAACTACAAGGTTGATTCCATATGCATCTTCAGTTCAATATTGTCTTTCAAGGCAATTGTTAAACATGTGCCACATTAGAGAGATGTATCTAATATCTCTTCCAACAACAGTGGTTTCACTATTCTCACTATCTACTGCTCAAAACATGTTATTGGAACAACTGATAGTTCGTGAATGTCATGGATTGAAGCACATAATTACTGATGTTGAAGAAGTTGATTTTGAACACATGAGCTATGACTCTATACTTCCAGAATTACGAAATCTCGATATTGAAGAATGCAACCTATTGGAATTTATATTGCCCGCTTGTTTTGCTCATTGTGCTTCTAACTTGATGTATTTGCGAATCAATAAAGGTCTAGAGCTGAAATCTGTGTTTGGACAGTGCTATCATTTATCTCATCAGGATGGAAATGTGATCCATATGAAGCATCTTGCTTTGAAAGAGTTACGCTTGTGGGACTGTCCTAAGTTATCAACCTGCAAGTTCATAAATGACTTCATGATTTGTTCTGATGCAAGGGAACCAGATTTCATAACCACCAAGGCAATTCTAAGGAAGGGGTTTAACTTGGAGACTGTAAAAATACTTGAAGTGAAGGGCTGTCCTATATTCTTCCCTGAACACCGAAACAAAGGTGATGAAGTTCTGCCACAGTTGTCCACTTCAGTAACATTACTGCCAATAGCTCCATCTAATCTTCCTGAATACCCAAACATAGTTGAGGGCAAAGAAGCAAAGCAGGAAGAGAAGCCCACAACCTTTGCAGACAACCAAAAACCAGACATGCTAGTAGTACAGCCAAGAGAAGTAGAAGAAACAGATGAAAGAAGCTATAAGTTTTCTATTGGCACTGTGCATAGTGGTACTAATCAAACAACGTTGCAAAGAAATGAACGGAGAACGATCAGAGTCAAAAGAAGtgttagaaatagaaaagggGAAATTGCTCAGAAAGGTTTTGCGCTAGAGAAACCAGGAATGGAGTTGGTGGATGAACAAAAACAATTACTCAGTGTACCAATTTTGATGGACCAACAAAGGAACGCGCTTGCAGTAACAGAAATTACCACTGAAATTCAAGAGAAAATCACTAATGCTGCTTCTAGTGAAATTATAGGGGGAAAAGTTCAACGAGAGAAAAATGAGATGGCAACTTCATCAAGTGATTCAGAAACAGGAAGTTTATTATCAGAAGGTGAAATTACTGTTAGCCAAACAGAAACTTCAAGGGTATTAGCGATAACAACTTCATTGAATCCTAATGAATACCAGAATGCAGGCGATTCTCCAAAAGAGCCGTTTACATTAGGTTCACAATATAACGCGACccttataaaagaaacaaaggaagaagtGGTAACTGAGCATATCACAACCTGTGCGGAAAGTAGAGATGCTCCTCTTGAAACTTCCACAAACCAAGCTATCAATATGATGAAAATGTTCATGGGAACAATGGCAGTCCTCTTGCAGTTCCTCTTTCAAGGCACTTCACAAGTGGCACTTCAGTTCACTAATATTGATCTATCATTAGGTGAGACACCAAAACAATTGTATCTTTCAGCTGCACCTCAATCTATCCATATGAATGAAAAGATTCAAGAGAGCAGTAGCAACCCCCTTGTAGATCTTCCTTCAACTTCAAGCAAATTTCCAAGTGgtGATGCTCAAGACGTGTCATCATCTACTCAACATAATGTGACTCCTGTAGAAGTTGAGAGAGAAATGGCAATCAACCAGGATGCTTCTCCTCAAACTTTTATAGAAGATGATatcaatatgaataaaaatctcCATGGGGGCAATCCTCTTGAAGATCCTCCTTCAAGGGACTCTACAAGTGGCACTTCAGGTGAGGCCCCAAAAGAGTTGTCTACTTCAGTAACAGTACCTCCAATAGCTTCATCCACTTCAttacttttatcaatttcacttCCTCCTATTGGCGCTTCACCATCGGAAGTTGAGCCACAGAGTTCTTATGCTGCACAACAAATCATAACTCCTGTTGAAGAATATGCTGCTTTTAGAGATATTGGTGTAATCAAGAAAAAGCATATCCCTCTTCTAGAACAAGCCATGGCAAATCACCCTTCTCTATGGGATTGGCACAAGAGATACAAGCGTTCACAAATGAAGCACTTGGGATACACCATTTTAGGTGATATGTTGGAATTTCTTGCATCAACAAGGTGGAGAGACCTCactcaagaaaagaaagctgaGTTTGAGTCTTTAGTGGATGAAATAGAGATGTTTCGCTTTGATATTCAATGGCTGGATAGTACTCGTGCAATGATTAAGCAAAGCAAGATAGATGAAGAAACCATTAATCAAATGAAGACACTTGAAGTAAAGGAGGCAGAACAACAGAATGAATTGGAGGTTTTAGAGGCTTGCCTTCACAAGGTTAAGATGGAACTATCCATTACTAAGTCACAATTATTGAACATAAGATCTGAGCTTGGGAACTTGGATAACTTCCTTGGATTTCGACCTTTTGTCTA 6341 0.3629 MTAVGEGFAASLASEASKGLFLLAKRHAGYCFHFKRYVEEFQTKLKNLESTENDALERERSAKENNEEITDVAKNWLGKAKDLIDAAEELKKKIEKPSMCAIGWCPNCIRRHGLGKKAAEIILELNKHNIDFKSDHFSRPAPPLGMEFHAHINFIDLESRKVAYDELWMALQDEEKMRIGVYAMGGSGKTTLVKELGYKAEKEKLFHKVAFVIVSNTLDVRRIQENIASQLGLTFRFSQESDRAKELWSRMTNGDKILIIFDDVWEKLDFKYIGIPFDEKHKSCKVLFTTRSVGVCTSMECQLNIQLSVLTEEDSWKLFQKYANINNDPSVPLYVAKEIARECKGLPVAIASLASTLKDNEPQEWEYALSTLKNSEPLIGIDEHLIEIYSCLRLSYANLKSREAQELFLLCSFFPEDDEIPVEDLTRYAIGLHLFGHDCSIMKARRLTLKAKKTLTDSCLLLNVESGEECVKMHDLIREVAQWIANKEIKEITGSKIDEDALDRTRYLWFHVNNDLLNQLNYPKLEVLMISVEIGQNISLKMKEGFFRGLHNLRVFILKMTLRLVSIKLPQSIQFLKGLRILCLDGLKLSNISIIGSLKSLESFELRNCEIDELPSEMVELNNLRLLDLSNCTILQNPFEVIGRFMQLEELYYFTEFLSVGWKIDGENISNFFGENCRLTNLARYRIQIGNLDDKLGEQLIPRGLSIDCFHPFTSNATLKSLVRRAEYLSLNKIKGGYKNIVPDVVQAVGGKIQWTKLRVRSCVDIECLIDASNVSSQDAGMLTALIELQVSSMDNLKEVCRGTPPSGFLEKLEKLHVDSCNQLHSILFVGRLNLRNLKAVEVRHCLMLTSLFTLSVALSLELLEKLYVYSCSGLKYIIADERGCEKDVFNQEISYTSIFSKLKSLVILNCENLEFIFPVCLARRLVLLEEIQIKDAAKLKYIFGQFQDEGGSLHKNDKEIMLPSLQKIILWDIPNFNSIFPMHCHLKDFPEMEATRLEATTPKALHSSQNHDTTWYTSAVQCLPRKLLVHCFQMEATALDTTTSKDASILSTSVELKVSLMDNLKELCDSTPPSGILEKLEKLIVIGCYQLRSISFGGNLNLCSLKDVKVESCSVLTSLFTVSVALSLVQLEKLHISACKGLEYIIADEKEWKNDNYNAKISSGSIFQKLKSVEIDECESLEFIFPVCLAGKLVRLELIRIKCAAKLKHIFGEFQNEGKGKPFLQNGEMMLPSLEKIVMNEIPNFNSIFPMYCNPKDCTEVEAISLEATTTMELQTTRLIPYASSVQYCLSRQLLNMCHIREMYLISLPTTVVSLFSLSTAQNMLLEQLIVRECHGLKHIITDVEEVDFEHMSYDSILPELRNLDIEECNLLEFILPACFAHCASNLMYLRINKGLELKSVFGQCYHLSHQDGNVIHMKHLALKELRLWDCPKLSTCKFINDFMICSDAREPDFITTKAILRKGFNLETVKILEVKGCPIFFPEHRNKGDEVLPQLSTSVTLLPIAPSNLPEYPNIVEGKEAKQEEKPTTFADNQKPDMLVVQPREVEETDERSYKFSIGTVHSGTNQTTLQRNERRTIRVKRSVRNRKGEIAQKGFALEKPGMELVDEQKQLLSVPILMDQQRNALAVTEITTEIQEKITNAASSEIIGGKVQREKNEMATSSSDSETGSLLSEGEITVSQTETSRVLAITTSLNPNEYQNAGDSPKEPFTLGSQYNATLIKETKEEVVTEHITTCAESRDAPLETSTNQAINMMKMFMGTMAVLLQFLFQGTSQVALQFTNIDLSLGETPKQLYLSAAPQSIHMNEKIQESSSNPLVDLPSTSSKFPSGDAQDVSSSTQHNVTPVEVEREMAINQDASPQTFIEDDINMNKNLHGGNPLEDPPSRDSTSGTSGEAPKELSTSVTVPPIASSTSLLLSISLPPIGASPSEVEPQSSYAAQQIITPVEEYAAFRDIGVIKKKHIPLLEQAMANHPSLWDWHKRYKRSQMKHLGYTILGDMLEFLASTRWRDLTQEKKAEFESLVDEIEMFRFDIQWLDSTRAMIKQSKIDEETINQMKTLEVKEAEQQNELEVLEACLHKVKMELSITKSQLLNIRSELGNLDNFLGFRPFV 2113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03184 2113 Coils Coil 73 93 - -
Bva12g03184 2113 PRINTS Disease resistance protein signature 619 635 - -
Bva12g03184 2113 PRINTS Disease resistance protein signature 343 357 - -
Bva12g03184 2113 PRINTS Disease resistance protein signature 178 193 - -
Bva12g03184 2113 PRINTS Disease resistance protein signature 251 265 - -
Bva12g03184 2113 Coils Coil 38 66 - -
Bva12g03184 2113 Gene3D - 152 307 IPR027417 -
Bva12g03184 2113 MobiDBLite consensus disorder prediction 1871 1907 - -
Bva12g03184 2113 SUPERFAMILY L domain-like 468 1144 - -
Bva12g03184 2113 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 11 989 - -
Bva12g03184 2113 PANTHER - 1079 1203 - -
Bva12g03184 2113 Gene3D Ribonuclease Inhibitor 1076 1443 IPR032675 -
Bva12g03184 2113 MobiDBLite consensus disorder prediction 1811 1844 - -
Bva12g03184 2113 Gene3D Ribonuclease Inhibitor 781 1001 IPR032675 -
Bva12g03184 2113 Gene3D Ribonuclease Inhibitor 501 706 IPR032675 -
Bva12g03184 2113 Coils Coil 2058 2078 - -
Bva12g03184 2113 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1079 1203 - -
Bva12g03184 2113 Gene3D - 396 483 IPR036388 -
Bva12g03184 2113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 411 IPR027417 -
Bva12g03184 2113 Gene3D - 309 395 IPR042197 -
Bva12g03184 2113 PANTHER - 11 989 - -
Bva12g03184 2113 MobiDBLite consensus disorder prediction 1658 1680 - -
Bva12g03184 2113 MobiDBLite consensus disorder prediction 1655 1680 - -
Bva12g03184 2113 MobiDBLite consensus disorder prediction 1885 1907 - -
Bva12g03184 2113 Pfam NB-ARC domain 164 397 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03184 Bva-Chr12 22799959 22811767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03184 179 648 WRKY Transcription Factor Family AT5G45050 22.770 3.29e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03184 - - mtr:MTR_1g031830 702.205