Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva12g03178 | ATGGTTTCTTCAGAAGAAAGTTCAGATCAACATGTTTCTTCCGATAAATTGCATCACAGAGTGAGTTCTCCTAGTGGAATTACAGTGTCACAAGAGATTACtgataatacaattaatttgtcCAAAACAGAGGAAACTAAAAACATTCCTCTTGTTACAGCTGAGAAAGATGCAAAAAATTCTGATGTTACTACTTCTGTACTGCATTCTGGTCAAGAAGGAACTACTTGCTCTTTAGCACTTGAGAAACCTTTGCAGAGCCTTAATACTGTTCCACGTACATTACAATCTAGTCAGGAAAGTCCCTCTATAATTCGTGAAATGGTCTCAGAGGATGGATATAACTGGCGAAAATATGGCCAGAAACTTTTTAAGggaaatgaatttataaaaaactaCTATAAGTGCACACATCCAAACTGCCTGGCAAAGAAGCAAATAAAACAGTCACATAGTGGGCAAGTTACAGATACCATTTGCATTGGTCAGCATAATCACCCTAGACCTCAACTAAATACCCAACCAGCAGTTGATGTTGTAGCGCCTGTTGTTAAAAAAAGACCCGACAAACCCTCTTTGGCCAATGTGGATGATGAAGCATCCACCGAGCACAGATGTGTGCCTCAACAGACGAAGCCTCTAGATTCTCTTCCAATTTCAGCAGTTTCCTCATGTAAAAAGGTCGAAGGTGTGCTGTTGCAATCAGCTAGTGTAGAGGAAGAGGTTCATAACAGTGGGGATCCTGAGTCAAAACGGCTTAAGAAAGACAATTGTGGTGCTGATGTTACTAGAATTGAGAAATCAACTAGTGAATCTCGTGCTGTTGTGCAAACCTCAAGTGATGTTGATTTTATAAACGATGGGTACCGCTGGCGCAAATATGGGCAGAAACTAGTAAAAGGGAATCCAAATCCAAGGAGTTATTACCGATGCTCAAATCCAGGATGTCCAGTGAAGAAGCATGTGGAAAGGGCTTCTCATGATCCAAAAGTTGTAATAACAACCTACGAGGGGAAGCATGATCATGATATGCCCCTTGGGAGAACTGTTACCCAAAATACTGAAGAAGATACTCGCAAAACAGCCAATAACAGCAAGTCGGGAAGCAAATCTGGAGGCACAAGCGGCTTAAACAATCAACTAAATGGTAAGAACCATCCCAATGAGGATCATGGAAGCAAGTCAAAGAGTAAACTAAATAAGCGATCTAGGCCTGATTCAGAAGCAGAACCAGTCAGAAACTA | 1244 | 0.4011 | MVSSEESSDQHVSSDKLHHRVSSPSGITVSQEITDNTINLSKTEETKNIPLVTAEKDAKNSDVTTSVLHSGQEGTTCSLALEKPLQSLNTVPRTLQSSQESPSIIREMVSEDGYNWRKYGQKLFKGNEFIKNYYKCTHPNCLAKKQIKQSHSGQVTDTICIGQHNHPRPQLNTQPAVDVVAPVVKKRPDKPSLANVDDEASTEHRCVPQQTKPLDSLPISAVSSCKKVEGVLLQSASVEEEVHNSGDPESKRLKKDNCGADVTRIEKSTSESRAVVQTSSDVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDPKVVITTYEGKHDHDMPLGRTVTQNTEEDTRKTANNSKSGSKSGGTSGLNNQLNGKNHPNEDHGSKSKSKLNKRSRPDSEAEPVRN | 414 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva12g03178 | 414 | SUPERFAMILY | WRKY DNA-binding domain | 106 | 169 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 408 | IPR044810 | GO:0003700 | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 364 | 386 | - | - | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 387 | 414 | - | - | |
Bva12g03178 | 414 | ProSiteProfiles | WRKY domain profile. | 280 | 345 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | ProSiteProfiles | WRKY domain profile. | 105 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 336 | 414 | - | - | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 188 | 207 | - | - | |
Bva12g03178 | 414 | SMART | WRKY_cls | 110 | 168 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | SMART | WRKY_cls | 285 | 344 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Bva12g03178 | 414 | Gene3D | WRKY domain | 272 | 338 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | SUPERFAMILY | WRKY DNA-binding domain | 277 | 345 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | MobiDBLite | consensus disorder prediction | 190 | 205 | - | - | |
Bva12g03178 | 414 | PANTHER | WRKY TRANSCRIPTION FACTOR 1 | 1 | 408 | - | - | |
Bva12g03178 | 414 | Pfam | WRKY DNA -binding domain | 286 | 342 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | Pfam | WRKY DNA -binding domain | 111 | 167 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva12g03178 | 414 | Gene3D | WRKY domain | 96 | 170 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva12g03178 | Bva-Chr12 | 22735152 | 22739270 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva12g03178 | 94 | 358 | WRKY Transcription Factor Family | AT2G04880 | 48.364 | 2.36e-83 | 261 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Bva12g03178 | WRKY | 3.7e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva12g03178 | K18834 | - | gmx:100782726 | 463.766 |