Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03178 ATGGTTTCTTCAGAAGAAAGTTCAGATCAACATGTTTCTTCCGATAAATTGCATCACAGAGTGAGTTCTCCTAGTGGAATTACAGTGTCACAAGAGATTACtgataatacaattaatttgtcCAAAACAGAGGAAACTAAAAACATTCCTCTTGTTACAGCTGAGAAAGATGCAAAAAATTCTGATGTTACTACTTCTGTACTGCATTCTGGTCAAGAAGGAACTACTTGCTCTTTAGCACTTGAGAAACCTTTGCAGAGCCTTAATACTGTTCCACGTACATTACAATCTAGTCAGGAAAGTCCCTCTATAATTCGTGAAATGGTCTCAGAGGATGGATATAACTGGCGAAAATATGGCCAGAAACTTTTTAAGggaaatgaatttataaaaaactaCTATAAGTGCACACATCCAAACTGCCTGGCAAAGAAGCAAATAAAACAGTCACATAGTGGGCAAGTTACAGATACCATTTGCATTGGTCAGCATAATCACCCTAGACCTCAACTAAATACCCAACCAGCAGTTGATGTTGTAGCGCCTGTTGTTAAAAAAAGACCCGACAAACCCTCTTTGGCCAATGTGGATGATGAAGCATCCACCGAGCACAGATGTGTGCCTCAACAGACGAAGCCTCTAGATTCTCTTCCAATTTCAGCAGTTTCCTCATGTAAAAAGGTCGAAGGTGTGCTGTTGCAATCAGCTAGTGTAGAGGAAGAGGTTCATAACAGTGGGGATCCTGAGTCAAAACGGCTTAAGAAAGACAATTGTGGTGCTGATGTTACTAGAATTGAGAAATCAACTAGTGAATCTCGTGCTGTTGTGCAAACCTCAAGTGATGTTGATTTTATAAACGATGGGTACCGCTGGCGCAAATATGGGCAGAAACTAGTAAAAGGGAATCCAAATCCAAGGAGTTATTACCGATGCTCAAATCCAGGATGTCCAGTGAAGAAGCATGTGGAAAGGGCTTCTCATGATCCAAAAGTTGTAATAACAACCTACGAGGGGAAGCATGATCATGATATGCCCCTTGGGAGAACTGTTACCCAAAATACTGAAGAAGATACTCGCAAAACAGCCAATAACAGCAAGTCGGGAAGCAAATCTGGAGGCACAAGCGGCTTAAACAATCAACTAAATGGTAAGAACCATCCCAATGAGGATCATGGAAGCAAGTCAAAGAGTAAACTAAATAAGCGATCTAGGCCTGATTCAGAAGCAGAACCAGTCAGAAACTA 1244 0.4011 MVSSEESSDQHVSSDKLHHRVSSPSGITVSQEITDNTINLSKTEETKNIPLVTAEKDAKNSDVTTSVLHSGQEGTTCSLALEKPLQSLNTVPRTLQSSQESPSIIREMVSEDGYNWRKYGQKLFKGNEFIKNYYKCTHPNCLAKKQIKQSHSGQVTDTICIGQHNHPRPQLNTQPAVDVVAPVVKKRPDKPSLANVDDEASTEHRCVPQQTKPLDSLPISAVSSCKKVEGVLLQSASVEEEVHNSGDPESKRLKKDNCGADVTRIEKSTSESRAVVQTSSDVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDPKVVITTYEGKHDHDMPLGRTVTQNTEEDTRKTANNSKSGSKSGGTSGLNNQLNGKNHPNEDHGSKSKSKLNKRSRPDSEAEPVRN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03178 414 SUPERFAMILY WRKY DNA-binding domain 106 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 408 IPR044810 GO:0003700
Bva12g03178 414 MobiDBLite consensus disorder prediction 364 386 - -
Bva12g03178 414 MobiDBLite consensus disorder prediction 1 33 - -
Bva12g03178 414 MobiDBLite consensus disorder prediction 387 414 - -
Bva12g03178 414 ProSiteProfiles WRKY domain profile. 280 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 ProSiteProfiles WRKY domain profile. 105 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 MobiDBLite consensus disorder prediction 336 414 - -
Bva12g03178 414 MobiDBLite consensus disorder prediction 188 207 - -
Bva12g03178 414 SMART WRKY_cls 110 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 SMART WRKY_cls 285 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 MobiDBLite consensus disorder prediction 19 33 - -
Bva12g03178 414 Gene3D WRKY domain 272 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 SUPERFAMILY WRKY DNA-binding domain 277 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 MobiDBLite consensus disorder prediction 190 205 - -
Bva12g03178 414 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 408 - -
Bva12g03178 414 Pfam WRKY DNA -binding domain 286 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 Pfam WRKY DNA -binding domain 111 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g03178 414 Gene3D WRKY domain 96 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03178 Bva-Chr12 22735152 22739270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03178 94 358 WRKY Transcription Factor Family AT2G04880 48.364 2.36e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g03178 WRKY 3.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03178 K18834 - gmx:100782726 463.766