Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03175 ATGGCTGCAGAAGCTAAGgtttctgcttctgcttctgtttctgcttctccttctccttccgcttctgcttctgcttctgcttcttcgAGTCCCTCAGATGCTGTAATATTCTTTGGGCTCAGTTTGGCGTTTGGGATAGCCTGCAGGCATCTTCTGAGTGGCACAAGAGTACCATATACAGTTGCTTTGCTCATTCTTGGCCTTGCTCTTGGATCCTTAGATTATTTTACGCATCATCAGCTGGGAAAGATTGGAGATGGAATCCGCCTATgGTCGGATATTGATCCAGAACTTCTGCTAGCTGTTTGTCTTCCTCCTCTTCTCTTCGAGAGCTCTTTGTCCATGGAAATCCACCAAATTAAgAGGTGTATGGCACAGATGATTTTACTGGCTGGTCCTGGTGTTTTGATTTCAACCTTCTTTCTTGGATCTGCTttgaagcTTACTTTTCCATATAACTGGAGTTGGAAAATATCATTGTTGCTTGGAGGACTTCTCAGTGCAACTGACCCAGTTGCAGTTGTGGCTTTATTGAAAGACCTTGGTGCCAGCAAAAAACTGAGTACAATAATTGAAGGGGAATCCTTGATGAATGATGGGACGGCAATTGTGGTTTATACACTATTCTATCGAATGGTCCTTGGAGGGAGCTTCAGCTGGGTAGCCATAATCAAATTTCTAGCTGTAGTTTCACTTGGAGCTGTAGGAATAGGTCTTGCTTTTGGGATGGCCTCTGTATTGTGGCTTGGGTCTATTTTTAATGATACAGTGATACAGATTACACTAACACTTGCTGTTAGCTACGTTGCTTACTTCATTGCTCAAGAGCATGCTGATGTGTCTGGTGTTTTGACGGTGATGACTTTGGGAATGTTCTACTCTGCAGTTGCAAAAACAGCTTTTAAAGGCGATGGCCAACAAAGCTTACATCACTTTTGgGAAATGGTTGCTTATATTGCTAATacattaatattcattttgaGTGGAGTTATTATAGCCGAAGCCATTCTCAATTGTCAGAATATCTCTGCTGATGGAAAATCATGGGTTAATCTCTTGCTCCTCTATGCATATGTTCAAGCATCTCGATGCATATTAGTTGCAGCATTGTATCCCTTTCTACGATATTTTGGATATGGTTTTGACTGGAAAGAAGCTATCATTCTCATCTGGTCTGGATTGCGAGGAACAGTTGCCTTGGCACTTTCATTATCAGTTAAGCATTCCAGCAACAAATCCATAGAATTGAGTGGAGATACAGGAAATATGtttgttttcttcactGGAGGAGTAGTGGTTTTGACGATTATTGTGAATGGTTCCACCACACAGCTCTTTTTACGCTTACTAAAAATGGACAAGTTATCAGAAACTAAGAGACGTATACTTGATTACACCAAGTATAAAATGCTGAACGAAGCCTTAGAAGCTTTTGGTGAACATGGAGGTGATGAGGTTTTGGGTTCTGCTGACTGGTCTGTGGTGAAGAGTTATATCTCATGCTTAAATGGCATTGATTGTGAAAACGTAGTTAATACTTATGCTACATCTGAAAGTGATGATAAGAACCTGAAAGATCTATTGGATCTGAAAGTTTTACGAATTGGCCTTTTGAATGGTGTTCAAGCTGCTTATTGGGAGATGCTTGAAGAGGGAAGAATTTCACGTAAAAtagcaaatattttaatgcGATCAGTGGACGAAGCTCTTGACTTGGCTTCACATCAGCCTTTATACGACTGGAAAAGTTTAGAAGCAAATGTTAACTTACCAGATTGCTACAAGTTCATTCAGAGTGCTTTTCCacagaaattaattacatatttcaCAATGGAAAGATTGGAATCTGCATGTTACATTTGTGCTGCATTTCTTCATGCACACGAAACTGCTCGAAGGAAGTTACATGACTTCATAGGAGacattgattttgtttctattgtCAAGAATGAAAGCCTtgcagaaggagaagaagcagaaaagTTCCTACAAGATGTCCGTGTAACATTTCCTCAGGTTTTGCGCGTCCTAAAAACAAGGCAAGCAACGCATCTAGTGCTAAATCATTTAACTAGATATGTTGAAAGCATCGTGAAAGTTGGGTTAGTTGAAGAGAAAGAACTGCTGCTTCTTCATGATGCTGTCCAGAGCGATTTGAAGAGACTAGTAAGAAATCCTCCATTGGTGAAgcttccaaaaataaatagtacGCATGCTATGTTGGGTGCCCTTCCATCTTCTGCTCGTGAACTGCTTGCAAGCAGTGCCAGGGAAATGATGATATTGCGAGGTTTGCCACTTTATAAAGAAGGCTCCAAAGCAAATGGCATATGGTTGATTTCTAGTGGGGTGGTGAAGTGGGAAAGCACGATGATAAGAAACAATCACTCTTTACATTCAACATTTGCACATGGGAGCACATTGGGTCTCTACGAATCACTAACCAAAAGGCGATATACCTGCGATGTTACCACAGATTCGGTGGTCCTCTGCTCTTTTCTTGAAGCTCACAAGATATCATCTCTCAGAACAGATTCTTCAGTGGAAAACTTATTGTGGCagGAATGTgctattttcctttccaaacTATTGCTTCCCCAGATATTTGAGATATTCGGAATGCAAGATTTAAGAACTCTATTTGCTGGCAGATCAGTAATGATATACAGGAGAGGGGATACAATAGAAATCCTTCATCATTCAATTGGCCTTTTACTAGAAGGAGAAGTTAAACCTCAAGGTGTTCAAGAATTGATAAAATCACCTACAGCTCTTGTTCCATCATATGGGAATCCAAACTTCCAAAGTCTGGAAACTTCTGGTAGGCAGCAAATTAGCTCTTCTCCTCGAGGATCCAGCTATTTAGTAGAGAAAAGAGCAAGGGTGATAATACTCGACATTGCAGCACTTGACGCTGGCATTGTTGACAGGTCAAGTTATGCAGTTGATGAATATCAGCATAGTTGTTTTGGTGGGGAGCATAGGAGTTTTATGAGCAGCCTTGAGAATCTCTA 3014 0.3782 MAAEAKVSASASVSASPSPSASASASASSSPSDAVIFFGLSLAFGIACRHLLSGTRVPYTVALLILGLALGSLDYFTHHQLGKIGDGIRLWSDIDPELLLAVCLPPLLFESSLSMEIHQIKRCMAQMILLAGPGVLISTFFLGSALKLTFPYNWSWKISLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGGSFSWVAIIKFLAVVSLGAVGIGLAFGMASVLWLGSIFNDTVIQITLTLAVSYVAYFIAQEHADVSGVLTVMTLGMFYSAVAKTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVIIAEAILNCQNISADGKSWVNLLLLYAYVQASRCILVAALYPFLRYFGYGFDWKEAIILIWSGLRGTVALALSLSVKHSSNKSIELSGDTGNMFVFFTGGVVVLTIIVNGSTTQLFLRLLKMDKLSETKRRILDYTKYKMLNEALEAFGEHGGDEVLGSADWSVVKSYISCLNGIDCENVVNTYATSESDDKNLKDLLDLKVLRIGLLNGVQAAYWEMLEEGRISRKIANILMRSVDEALDLASHQPLYDWKSLEANVNLPDCYKFIQSAFPQKLITYFTMERLESACYICAAFLHAHETARRKLHDFIGDIDFVSIVKNESLAEGEEAEKFLQDVRVTFPQVLRVLKTRQATHLVLNHLTRYVESIVKVGLVEEKELLLLHDAVQSDLKRLVRNPPLVKLPKINSTHAMLGALPSSARELLASSAREMMILRGLPLYKEGSKANGIWLISSGVVKWESTMIRNNHSLHSTFAHGSTLGLYESLTKRRYTCDVTTDSVVLCSFLEAHKISSLRTDSSVENLLWQECAIFLSKLLLPQIFEIFGMQDLRTLFAGRSVMIYRRGDTIEILHHSIGLLLEGEVKPQGVQELIKSPTALVPSYGNPNFQSLETSGRQQISSSPRGSSYLVEKRARVIILDIAALDAGIVDRSSYAVDEYQHSCFGGEHRSFMSSLENL 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03175 1004 PANTHER - 28 972 - -
Bva12g03175 1004 MobiDBLite consensus disorder prediction 9 29 - -
Bva12g03175 1004 Pfam Sodium/hydrogen exchanger family 36 448 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva12g03175 1004 SUPERFAMILY cAMP-binding domain-like 734 840 IPR018490 -
Bva12g03175 1004 Gene3D Jelly Rolls 733 864 IPR014710 -
Bva12g03175 1004 PANTHER SODIUM/HYDROGEN EXCHANGER 28 972 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva12g03175 1004 Gene3D - 157 207 - -
Bva12g03175 1004 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03175 Bva-Chr12 22716533 22730477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03175 31 1004 Antiporters AT2G01980 61.972 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03175 - - gmx:100789429 1311.98