Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03134 ATGCTGCCAAAGCGCCATTCATGGACCATCGACCCTGATTTAGACGGCATCGATCTCGAGCCCTCCGATTTTGGCTCCTCCTTACCCCTCAAGAAGGTCCCATACGGCGACGTTTTCGAGGCCTCTCGTGCCGGCGACGTTGACCGGCTCCGATACCTGCTTGAGTCTGGAGTGAATTTGAATGCTCGGGACCAGTGGGACTCTGTGGCTTTATACTATGCTTGCCTCGCGGGTCACCTCGATGCTGCGAGGATGCTGCTTGAGAGCGGTGCTATCTGCTCCGAGCACACCTTTGATGGAGACCGTTGCCATTATGCTGCCCTCAATTTGAAGGTGAGGAAGCTGTTGAAGGCGTTTGAGGCGAGACCACCGCCACTGGGTCCACTGCAGGCGGCGCTCAGAGACATTTTCTTGGCTTGCACCGCTAATAAGACCTTCTTGGAGTTGGCTGATCCTCAGTTTCAAATTTCTGGTATTTCATCCGCTCAGAGCTCCAATCACAACCACTTTCCTCCAGATGTGGTTTTCTTTATACAAGGAAGACCTATTGAAGCTCATAGAATCATATTAAGTGCAAGATTGGAGATTGCAGTAGATGATATGGAAGATCTTGTGAGAATCTGCAAAGTATGCAAGTGTGAATCGCTGCAGACGATCCTTGAGAAAGAACTAATCCATCAGAAATTTGCAGAGTATAAAGCACTGAGGGATATAGACAATTCGCAGAAACGGTTTATTTTACAGGGTCTTTCCCTTCCTGAAGAAGACAGGCTTCCAGCAGCCTTGCATCGAGTCCTTCAGCTTGCCCTTTCAAATTCCACTCAGGAAAACAGTCAAGATGATGGAATTGATAAATTGATATCTGGGGTGAGTTCCATCCAGATTGCTAATAATATTGACGATCTTGCGGATATTTGTGTAAGAgttgatagaaaattttttcgCTGCCATCAAGTCATTTTAGCAGCAAGGTCAGAGTACTTCAGAACAAGATTGTCACGAATGGAGGACTTCCATGAAGGGAAAGATGAGTTACTTTTTAATTCCCTTCCTTGTCTTGAAGAACATGATTTGAGCATGGAAGCATTTGAGAAAATGATTGAGTATATGTACACTGATGGTTTGAAAGATATAGATCCAGACCAGGCTGAAGAAATGTTTGATGCTGCTTCTAGATATTTATTGTTTCCTCTCAAACGTGCAGTAGCTGATGCACTGCTGCCACACTTGGAAATGGTGTCACCAGCAGAACTTTGCCATTGGTTAATACTGTCAGACATGTACGGTGTTTTCAAGATACGAGAATATTGTCTAGACATCATGGCTTCTAATTTTGAAACATTTGCTGATACCAAAGAATTTCGCGCAATGCTATTAACCCTGCCGCCGCCATCTGGAGATTCCTCTCTTCGTACAACTGTTCCAAGTGTTCCTGGGGCTGTTCTAAACACTGATCAAGGCAATCTTCTTGATGATCTGCGAGAAAAATGGCTTGAAGTTGAAGCTGCTGAGCTTGATGAGAGAGATGAGAGTGCATTGCAGTTTGATAAGCGCCTTGAGATGCTTATGGTTGTTGCAGAGCAAGAAAAAGCAGGCAATGCTGATTCAGACGATATTGATAATTTCCCCACAGCAACCACTTCATCTCCTCTAATCTCTGCTCAACAGAAAGAGCAGCTGTA 1682 0.4471 MLPKRHSWTIDPDLDGIDLEPSDFGSSLPLKKVPYGDVFEASRAGDVDRLRYLLESGVNLNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDIFLACTANKTFLELADPQFQISGISSAQSSNHNHFPPDVVFFIQGRPIEAHRIILSARLEIAVDDMEDLVRICKVCKCESLQTILEKELIHQKFAEYKALRDIDNSQKRFILQGLSLPEEDRLPAALHRVLQLALSNSTQENSQDDGIDKLISGVSSIQIANNIDDLADICVRVDRKFFRCHQVILAARSEYFRTRLSRMEDFHEGKDELLFNSLPCLEEHDLSMEAFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADALLPHLEMVSPAELCHWLILSDMYGVFKIREYCLDIMASNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPSVPGAVLNTDQGNLLDDLREKWLEVEAAELDERDESALQFDKRLEMLMVVAEQEKAGNADSDDIDNFPTATTSSPLISAQQKEQL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03134 560 CDD BTB_POZ_ZBTB_KLHL-like 302 393 - -
Bva12g03134 560 SUPERFAMILY POZ domain 300 409 IPR011333 -
Bva12g03134 560 ProSiteProfiles Ankyrin repeat profile. 41 65 IPR002110 GO:0005515
Bva12g03134 560 Pfam Ankyrin repeats (many copies) 40 87 IPR002110 GO:0005515
Bva12g03134 560 ProSiteProfiles BTB domain profile. 303 379 IPR000210 GO:0005515
Bva12g03134 560 Gene3D Potassium Channel Kv1.1; Chain A 296 452 IPR011333 -
Bva12g03134 560 Pfam BTB/POZ domain 301 406 IPR000210 GO:0005515
Bva12g03134 560 SUPERFAMILY Ankyrin repeat 40 116 IPR036770 -
Bva12g03134 560 Gene3D - 38 250 IPR036770 -
Bva12g03134 560 MobiDBLite consensus disorder prediction 530 560 - -
Bva12g03134 560 SMART BTB_4 303 410 IPR000210 GO:0005515
Bva12g03134 560 MobiDBLite consensus disorder prediction 539 560 - -
Bva12g03134 560 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 11 195 IPR044515 -
Bva12g03134 560 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 193 526 IPR044515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03134 Bva-Chr12 22473559 22478515 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g03134 BTB 3e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03134 K10520 - qsu:111999987 865.144