Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03105 ATGAAAGTGGATGAACTTCAACTCCAACTTCACCTTCAGCAGCACAAGCAGAAGGAAAGGGAAGAGACCCAGATGTGCAGGAAGCTCCGAATGGGTGTATCCGACCTATCTCAGCCTATTTCCTCCGATGATGATGCCTGTGATAAGGTAGAAGAGGAGGATCTATTCGTCCCTCCCCTCAATTTTGCTATGGTAGATAATGGCATTTTCAGGTCTGGCTTCCCTGAACCTTCTAACTTCACCTTCCTGCAAAGCCTTGGCCTCCGCTCCATCATATATCTATGCCCCGAGCCGTATCCTGAGACCAACATGGAGTTTTTGAAGTCAAATGGGATCAAGCTATATCAATTTGGGATTGAAGGTCATAAGGAGCCCTTTGTGAACATTCCAGACGACACAATCCGAGAAGCGCTAAAAGTCGTCCTTGATGCCAGGAATCGCCCAGTTTTGATTCACTGTAAAAGGGGAAAGCACCGAACAGGTTGCCTTGTGGGATGCTTCAGGAAATTGCAGAAGTGGTGCTTGTCATCTGTGTTTGATGAGTATCAAAGGTTTGCAGCTGCCAAAGCAAGAGTTTCAGACCAGAGATTTGTGGAGTTGTTCGATATTTCCAGCCTGAAGCACTTGCcaattccattttcttcctccaaGAGGTA 656 0.4527 MKVDELQLQLHLQQHKQKEREETQMCRKLRMGVSDLSQPISSDDDACDKVEEEDLFVPPLNFAMVDNGIFRSGFPEPSNFTFLQSLGLRSIIYLCPEPYPETNMEFLKSNGIKLYQFGIEGHKEPFVNIPDDTIREALKVVLDARNRPVLIHCKRGKHRTGCLVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPFSSSKR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03105 218 PRINTS Plant and fungal dual specificity phosphatase signature 112 126 IPR020428 GO:0016791
Bva12g03105 218 PRINTS Plant and fungal dual specificity phosphatase signature 129 143 IPR020428 GO:0016791
Bva12g03105 218 PRINTS Plant and fungal dual specificity phosphatase signature 93 106 IPR020428 GO:0016791
Bva12g03105 218 PRINTS Plant and fungal dual specificity phosphatase signature 56 73 IPR020428 GO:0016791
Bva12g03105 218 CDD PFA-DSP_Siw14 55 202 - -
Bva12g03105 218 PANTHER - 36 216 - -
Bva12g03105 218 ProSiteProfiles Dual specificity protein phosphatase domain profile. 61 215 IPR020422 GO:0006470|GO:0008138
Bva12g03105 218 Gene3D Protein tyrosine phosphatase superfamily 55 205 IPR029021 -
Bva12g03105 218 PANTHER TYROSINE-PROTEIN PHOSPHATASE 36 216 - -
Bva12g03105 218 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
Bva12g03105 218 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 124 164 IPR000387 GO:0016311|GO:0016791
Bva12g03105 218 Pfam Tyrosine phosphatase family 57 208 IPR004861 -
Bva12g03105 218 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 203 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03105 Bva-Chr12 22238783 22243048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03105 54 218 Protein tyrosine phosphatase (PTP) family AT4G03960 79.394 8.70e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03105 K18045 - gmx:100814279 342.043