Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03092 ATGCATGATTTACTTCAAAAAATGGGTAGAAGTATTGTCTGTGAAGAATCTCAAAATGATGTTGGAAATCGCAGTAGATTGTGGTCTAAAGAAGATATTGATCAAGTTTTAAGAACTAATAAGGGAACTAGACTAATTCAAGCTATAGTTCAAGAGTCATCCGAGCAATATGAAGTCTACTCAAATCCTAAAGCCTTTTTGAAGATGTGTAATCTTAGATTACTCGTGATATCTGATGTGCATCTTCCCCTTGGGCTCAAATACCTTCCTGATTCAATAAAAGTTCTTGCATGGGAGGGATATCCTTTGAATGTTCTGCCACTTGGTCTACACAATGAACTTGTTGACCTAAAAATGCATCATAGCAAAATCACAAAACCTTGGGATGAAACTCAATTTTTTGGAAAGCTAAAGGCTATCGATTTGAGTCATTCCAATGATTTGGTTCAGACTCCAATTGTATCTGGGATTCCATATCTTGAACGGTTAATTCTTGAAGGTTGTATAAATCTTGTTGAGTTTCATCAATCTGTTGGACAACATAAGAAGCTTGTGGAAGTGAATATGGAAAATTGTATCagtcttaaaatttttccaaGTAAACTGGAAATGAGTTCTCTGGAGGAAATAATTCTATCTGGTTGCTCTCAAGTTACAAAGCTTCCTGATTTTGGAGAGAACATGGAACGTCTTTTGATCCTTAATTTGAAGGACTGCAAAAATCTTCTTTGTCTTCCAAATACCATTGGTAACTTGAAATCTCTTGAAACTCTCACTATTTCAGgttgttcaaaattttcatggcTACCAAACAACATAGATGAGACTGAGGCTTTTGAAGAGATTGATGTGAGTGGACCTAGTGTAAGAGATTTGATTTCATCCAACTCAAAAGGTTTCCAACTCCCACTGAAAACATTCTTTCGTATGTCAAATCTGTCCCTTTTGAAGGAATTGGATATAAGTTACTGTAATCTTGGTGGTGGATTGGTTCCGGATGATTTCGGCTGCTTATCATCATTGTCGAGGCTAAATTTAAGTGGGAACAATTTTGTTAATCTTCCTGCTTATTGCATAGCAAATCTTTCTAATCTGTATTATCTTGACCTAAATTCTTGCCCTATGCTTCAGACATTGCCTATCCTTCCACAGGATCTGTATCAGTTATTTGCAAGAAATTGCCCTTCGATGGAACCTTTGCTTGATCCACTGCAGCTATGGAATCTCTACGGGTTGGAAGACCATAAGATGATATCTTCGCTTCGTCCTTCCTGTATAATCACAGGGAATGAAATCCCACCATGGTTTGAGCATCAAAGTTATGCATTCCATGACATGAGACTTGAGCAATCAGGTATCGATTCAATTATGTCAATATCAGTATACATCCCTCAATATTGTCGTTCCAGTGAATGGTGGAGAATTGATGTATGCCTTGTGCTGGAATTTGTGGCGTCTTCTTCCATGAGAGGAAGTTCTCCAGATCACCTTTCTGCCTCCATTCATTTGAATGTTGAAAGTACCAAACAAGGAGTTCCTTCCCATGAGGATAGCGTCTACATCAACAAACAGTTTGAGTGCCCTCACCTATGGATTACGTCTTTGAGAGGTTTACAGGAACATCTAAGAGGTGAAACCCATCAACTTCAACTCATATTTTTCACTAAAACTCATGGAGGCAatcattatttgaaaataaggaAATGTGGGTGCCATGTGTACTGTAAGGAAGATGTACAACTCTGGCATAGGGCAAAGGGTTACATTGAGAATTGCccttcattttcatcttctaCTTCCACTTCCACAAGTTCCAGAAGTCTTATAGGAAAATCTTCTACTTCCCCTTCCACTTCCACAAGTTCCAGCAGTCTTTTAGGAAAATCTTCTACTTCCACAAGTTCCAACAGTCTTATAGCTCGTTTGGTACAAAGAACAGTGTTcta 1946 0.3684 MHDLLQKMGRSIVCEESQNDVGNRSRLWSKEDIDQVLRTNKGTRLIQAIVQESSEQYEVYSNPKAFLKMCNLRLLVISDVHLPLGLKYLPDSIKVLAWEGYPLNVLPLGLHNELVDLKMHHSKITKPWDETQFFGKLKAIDLSHSNDLVQTPIVSGIPYLERLILEGCINLVEFHQSVGQHKKLVEVNMENCISLKIFPSKLEMSSLEEIILSGCSQVTKLPDFGENMERLLILNLKDCKNLLCLPNTIGNLKSLETLTISGCSKFSWLPNNIDETEAFEEIDVSGPSVRDLISSNSKGFQLPLKTFFRMSNLSLLKELDISYCNLGGGLVPDDFGCLSSLSRLNLSGNNFVNLPAYCIANLSNLYYLDLNSCPMLQTLPILPQDLYQLFARNCPSMEPLLDPLQLWNLYGLEDHKMISSLRPSCIITGNEIPPWFEHQSYAFHDMRLEQSGIDSIMSISVYIPQYCRSSEWWRIDVCLVLEFVASSSMRGSSPDHLSASIHLNVESTKQGVPSHEDSVYINKQFECPHLWITSLRGLQEHLRGETHQLQLIFFTKTHGGNHYLKIRKCGCHVYCKEDVQLWHRAKGYIENCPSFSSSTSTSTSSRSLIGKSSTSPSTSTSSSSLLGKSSTSTSSNSLIARLVQRTVF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03092 648 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 221 - -
Bva12g03092 648 Pfam Leucine Rich Repeat 114 132 IPR011713 -
Bva12g03092 648 SUPERFAMILY L domain-like 56 399 - -
Bva12g03092 648 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 221 IPR044974 GO:0006952
Bva12g03092 648 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 206 406 IPR044974 GO:0006952
Bva12g03092 648 Gene3D Ribonuclease Inhibitor 53 203 IPR032675 -
Bva12g03092 648 Gene3D Ribonuclease Inhibitor 204 281 IPR032675 -
Bva12g03092 648 Gene3D Ribonuclease Inhibitor 282 430 IPR032675 -
Bva12g03092 648 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 206 406 - -
Bva12g03092 648 MobiDBLite consensus disorder prediction 594 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03092 Bva-Chr12 22136304 22139722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03092 1 295 WRKY Transcription Factor Family AT4G12020 34.036 6.92e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03092 - - gmx:100799850 473.011