Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03090 ATGGGTAGAAAAATTGTTACTCAAAAATCTCCAAATGACATTGGAAGACGCAGTCGCTTGTGGTCTATAGAAGATATTGATCATGTTTTGAGAGATAAAATGggTACTCGGTTCAATCAAAGTATAGTTTTAGAGCCATCACCTGAGCTATATGAAGTATATTCAGACCCTGAAGCTTTCTTAAACATGTGTAATCTCAAACTACTCATGATTTCTGACGTGCACCTCCTCTCTGGCCTCGTATGTCTTCCAAATTCATTAAAAGTTCTTGCATGGGATGGATATCCCTTGGAAGCTTTGCCATTGGGTAAGAGGGTTGAGCTTGTGGACCTAAAAATGCATCATAGCAAAATCATACAACCATGGAATGAAACTCAATTTTTCAGAAAGTTAAAGTCCATTGATTTGTGTCATTCCAAAGATTTGACTCAAACTCCAATTGTGTCTGGAACCCCTCATCTTGAGCAATTAATTCTTGAAGATTGCACAAGCCTAGTTGAGGTTCACCAATCTGTTGGACAACACAAGAAACTTACTATATTGAACATGAAAAACtgcataaatcttaaaatctttCCAAGTAAGCTAGAAATGGGTTCTCTCAAGGATCTCATTCTTTGTGGTTGCTCAAAAGTTGTAAAGCTTCCAGAGTTtggagaaaatatgaaaagccTTGTGATGCTAAATTTGAAGGATTGTGAAAATCTTTTATGTCTTCCAAGTACCATTCGTAACTTGAAATCTCTTGAAATTCTCAACATTTCTGGCTGCTCAAAATTTTCTAGGCTGGCAAACAATGTGGATGAAGATCAGCCTCTTGAGGAGCTTGTTCTGAGTGGAACTGCTGTAAGAGATGTAAATTCTTTCAATCCTATTCCAATGGATATGATTTTCACTACTATTTCCCATTTACCCCTTTTGAAGGAATTGGATTTAAGTTTCTGCTATCTCAGTGATGGATCCATTTCTTTTGATCTTAGCTGCTTGTCATCATTGGGAAGACTATCTCTGAGTGGGAATAACTTTTCTCTCCTACCTGATAATTTCGTGGCTAATCATTCTAAGCTACGCTTTCTTGACTTAAATTATTGCAAAAGCCTTCTGAAGCTGCCTATAGTTCCACAACATTTGCGTCAGTTAAACGCACAAGCTTGTTCTTCATTGGAACCAGCATTTGATCCACTGAAGTTATGGAATTTCCTAGCCTCAGATGACAATGAGtttgattttttacagATAAAATCTTTGGCCCAAGTTCATGTTGTTGTTACAGGGAGTGAAATTCCACCATGGTTTGAGAGTCAAAACTATGTTTCTCTGAACAATGAAGATTCAATTATCTCCATAAGAGTAGATATCCCTCTCCATTGCATCATAAGTGAATGGTGGAGAATTGATTTATGTCTTGGGTTGCAATTTGTGTCATATAATCCATTAGAACGGCCTCCATGTTTTGTTTACTGGTCAGTTTCATCTACCGAACCCGGCTTCCCGTCCCGCGGGGATTATGCTTGCATCCACATAGATCTGTTTCATCCCCCtatcctatttattttatctttgggaGGCCTACAAGAACAACTACAAGGTGATAGCAACCAACTTGAAGTAAGAATTTCTACTAGGGCTCTTTTATCAATTGGTAGGCTGACAATAAGGGAGTGTGGGAGCCATGTGTACTGTAAAGATGATGTTGAACCCTGGCACAGTGCAAAACATTCTCAATTGCAGATCTCTGAAGACCACATTTGGGACAATGAAAAGGAGAACATAGAGTCCATTGAGAAAATCCCTTCTACTTCTGGGAATTCCAGCAGTCGCAATGCAATGAGAATATGCCAGCCGATTCACCCAACAACAGATAATCAAAATTTGCAGAAATTTCCAATCAAAAGTGAAGATGTGATTAATCCAAGtTCTTCGATgcctaattcaagcatgagCGAAAGCAGTGACCCAAGGCCAGTCAGATTCCACAATAAGACATGCTTGTGTGAGCAAAGAGCTGCCCTGAAGGAAGTAGATGATAGGTTTGACATTGATAGCAAGATTTA 2054 0.3724 MGRKIVTQKSPNDIGRRSRLWSIEDIDHVLRDKMGTRFNQSIVLEPSPELYEVYSDPEAFLNMCNLKLLMISDVHLLSGLVCLPNSLKVLAWDGYPLEALPLGKRVELVDLKMHHSKIIQPWNETQFFRKLKSIDLCHSKDLTQTPIVSGTPHLEQLILEDCTSLVEVHQSVGQHKKLTILNMKNCINLKIFPSKLEMGSLKDLILCGCSKVVKLPEFGENMKSLVMLNLKDCENLLCLPSTIRNLKSLEILNISGCSKFSRLANNVDEDQPLEELVLSGTAVRDVNSFNPIPMDMIFTTISHLPLLKELDLSFCYLSDGSISFDLSCLSSLGRLSLSGNNFSLLPDNFVANHSKLRFLDLNYCKSLLKLPIVPQHLRQLNAQACSSLEPAFDPLKLWNFLASDDNEFDFLQIKSLAQVHVVVTGSEIPPWFESQNYVSLNNEDSIISIRVDIPLHCIISEWWRIDLCLGLQFVSYNPLERPPCFVYWSVSSTEPGFPSRGDYACIHIDLFHPPILFILSLGGLQEQLQGDSNQLEVRISTRALLSIGRLTIRECGSHVYCKDDVEPWHSAKHSQLQISEDHIWDNEKENIESIEKIPSTSGNSSSRNAMRICQPIHPTTDNQNLQKFPIKSEDVINPSSSMPNSSMSESSDPRPVRFHNKTCLCEQRAALKEVDDRFDIDSKI 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03090 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 212 IPR044974 GO:0006952
Bva12g03090 684 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 200 437 - -
Bva12g03090 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 200 437 IPR044974 GO:0006952
Bva12g03090 684 SUPERFAMILY L domain-like 52 388 - -
Bva12g03090 684 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 212 - -
Bva12g03090 684 MobiDBLite consensus disorder prediction 634 653 - -
Bva12g03090 684 MobiDBLite consensus disorder prediction 634 655 - -
Bva12g03090 684 Gene3D Ribonuclease Inhibitor 52 197 IPR032675 -
Bva12g03090 684 Gene3D Ribonuclease Inhibitor 198 271 IPR032675 -
Bva12g03090 684 Gene3D Ribonuclease Inhibitor 272 403 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03090 Bva-Chr12 22116793 22119736 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03090 2 310 WRKY Transcription Factor Family AT4G12020 33.815 1.38e-34 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03090 - - gmx:100799850 402.519