Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03085 ATGAAAAAAGATGACGTgacaaaaattctgaaaaattGTGGCCTTAATGCAACCATTGGAATAAAGgttttgattgaaaaatcATTGGTAACTTCTGATGGATGGACTTTGGAGATGCATGATTTACTTCAGAAAATGGGtagaaaaattgtttctcGAGAATCTTCAAATGACATTGGAAGTTGTAGCCGGTTGTGGTCTATAGAAGATATTGATCATGTATTGGGGTATAAAAGGgGTACTCCATTCATTCAAGGTATAGTTTTAGAGCCATCCTCTGAAGCATATGAAGTATATTCAGACCCTGAAGCCTTCTCAAACATGTGTAATCTCAAATTACTCATGATATCTAACTTGAACCTTTTCTTTGGTCTCACACATCTTCCAAATTCATTAAAAGTTCTTGCTTGGGATGGATATCCTTTGGAAGCTCTGCCATTGGGAAAGCAGAATGAGCTGGTGGACCTAAAAATGCATCATAGCAAAATCATACAACCATGGAATGAGACTCAATTTTTCAGAAAGTTAAAATCCATCGATTTGTGTTATTCCAAAGATTTGATTCAATCTCCAATTGTGTCTGGAGCTCCTCATCTTGAACGGTTAATTCTTGAAGGATGCATAAACCTAGTTGAGGTTCACCAATCTGTTGGACAACACAAGAAGCTCGTTGAGctgaatatgaaaaattgcataaatcttaaaatctttCCAAGTAAACTGGAAATGGGTTCTCTCAAGGATTTCATTCTTTCTGGTTGCTTGGAAGTTGAAAAGCTTCCGGAGTTCggagaaaatatgaaatgccTGGTGATGCTTGATTTGAAGGATTGTAAAAGTCTTTTATGCCTTCCAAGTACCATTAGTAATTTGAAGTCTCTTGAAATTCTCAACATTTCTGGCTGCTCAAAATTTTCTAGGCTGCCAAACAATGTGGATGAAGAGCAGCCTCTAGAGGAGCTTGATGTGTGTGGAACTGCTATAGGAGATATAACTTCATTCAATCCTATTCCAATGGATATGATTTTTACTACAATTTCACATTTACCCCTTTTGAAGGAATTGGATTTGAGTTACTGCAATCTCAGTGATGGATCAATTCCTTATGATCTTAGCGGCTTCTCATCGTTGTGGTTTCTATCTTTGAGAgggaataatttttcttacctACCTGATAATTTCGTGGCTAATCATTCTAAGCTACGTTTTCTTAACTTAGATAACTGCACAAGCCTTCAGAAGCTGCCTATAGTTCCACAAACTTTGACACGCTTAGTTGCACATGGTTGTGCTTCACTGGAACCAGTATTTGATCCACTGCAGTTGTGGAACTTCCTTTCATTAGATGACAAAAAGATGGAATCTTCAGATCTTCCTCGTTCTGTTATTGCTGGGAGTGAAATTCCACCATGGTTTGAGTATCAAAATTATGTTTCTCTAGATAGAGAAGATTATGATCTTGATTCAATTATCTCGATAACAGTGCACATCCCTTACTATTACCGCTTGAGTGAATGGTGGAGAATTGATTTATGCTTTGTGTTGGAATATGTGACATCTGACCCATCAGAGGAAACCCTAGCTTCTGTTAATTGGGTTGTTTTAGCAACAGATCCTTCCTTCCCTTCCTATAGGGATTGTGTGTATACCCgcacaaattattttcataccCCTCACCTGTATATTACATCTTTGAGAGGTCTACAGGAACAGCTAAGAGATGATAGCAACCAACTTGAAATAAGAATTGGGACTAAGACTTATGTAGGACGTGGTAGGTTGAAAATAAGGAAGGGTGGGTGCCACGTGTACTGTAAGGATGATGTGGAACTCTGGCACAGAGCAAAGGCTTCCATTGATTATACTTCCAGTACTTATACTTCTAACTCCAGCACTTCTAGTACAGTGAGGGCATTATCCCTTCCAAGTGCCCTAACTTCAGCAGAGACAGCAAGTGATGATGCTATGAATTCAAGGGACACATCGCTACAACCTCAATTTCAGATGTCCAGTGAATACATCATTGACAATGAAAAGaacaacataaatattaatattgatgatGCAATGAATTATTCAAGGGACATATCACAACCTGATCATGATTTACAGATGTCCAACGATGAATACATCATGGATAATGAAAAGGAGAACATGTGCAATCCCAGTGATGTGAGAATATCCCAACCGATTCATCCAACAACATATCATGAAGATTTGCAGAAACTTCCATTGAAAAGTGATGATGTGATTAATCCAAGTTCCTCAATGCCTAATGCAAGCTTGAGTGAAACCAGTGAGATAAGGCTGATCAGAGTTTGTAATAAGACTTGCCTGTGTGAGCAAAGAGCTGCTTTGAAGCAAATCCATGCTTGGCTTTCCATTCTGAATGTACAAAAAACAATGGCATCCGCAGAGTCAAGCGACGGAGATCATGTCGTAGAGCTTATTGTGCGTAATTCTGATGCATCACCAACTGATGCTGTTGCCGTTGCTGTTGCTGATACCGCTACGAATGAGATAGACCCTCTTCTCACGCAGGCTGAGAGGCCCAAGATTAACATTTTCACCGTTTCTTATCCGCGAAGAAGACCCAGAGATGAAGTGACAAGGTTACTTGAGACAGAAACGTCTCCTTTGACTCAGTTTATGTTATGGGTGTGGAATGGATCTAGATACTCTGGTCTACTTTGTATGACCCTTTCATCTATCATCTACTTTCTCATGGAAGTTCTTGCCAATAGTTTTTCTGTTCAGCAAATTCCTTTGTTTGAGACTGCTTTTACGAGATGTACAATGATCTTGATATTGTCATATGTGTGGTTGAGAAGGAGTGAACAACCATTTTTTGGAACATCTAATGTTAGAAACATTCTGGTTACAAGGGCCCTTATAGGCTATCTGTCTTTGTCCAGTTTTATATATTGCATCCAAAGGTTGCCTTTTTCCCAGGctattctattaaatttaacaacTCCAATTATGGCTTCAATTATGGCAAGAATCTTTTTGCATGAGAAGTTGAACATTACTGATATTGCCGGTATTGCTTGCAGTTTCTTTGGTGTGATCTTCATTTTCCAGCAAATGCTTGCTGAACAAGGACAGTTAGTTAAAGCTGAGGAATCAAGCAATGCAAATGGCAAGAGAATTTTACACATATTTAATGTCTTACTTGGTGTCTTTTCATCAATGACTGGTGGAATTAGCTACTGCCTTACAAGGGCTGGAGCAAAAGCATCTGACCAGCCACTGGCAACAGTCTTTTCATTTGGCTTACTGGCTAGCCCTGCATCAGGGATATGCACATTCTTCTTTGAGGATTTTGTTCTTCCAGGACTCCAGTCAATTTTGCTTATGCTTTTAATTGGTGTTCTGGCCTTCTTTGCTGAGGTTTTGATAGCACGAGGACTGCAACTAGAGAGGACTGCCAAAGTTGCCAATGTCCTCTATATGGAGGTAGCACTGTCCCAATTGTGGGGTATTGCCTTTTTAAGAGTGGCTCCATCTTTTGGTCCGATCATTGGatgtttactaatttttatttctgtaaGTTGCACAATGTATATTGGGCCTGATAAAGAGACAGATCAACCTTA 3599 0.3754 MKKDDVTKILKNCGLNATIGIKVLIEKSLVTSDGWTLEMHDLLQKMGRKIVSRESSNDIGSCSRLWSIEDIDHVLGYKRGTPFIQGIVLEPSSEAYEVYSDPEAFSNMCNLKLLMISNLNLFFGLTHLPNSLKVLAWDGYPLEALPLGKQNELVDLKMHHSKIIQPWNETQFFRKLKSIDLCYSKDLIQSPIVSGAPHLERLILEGCINLVEVHQSVGQHKKLVELNMKNCINLKIFPSKLEMGSLKDFILSGCLEVEKLPEFGENMKCLVMLDLKDCKSLLCLPSTISNLKSLEILNISGCSKFSRLPNNVDEEQPLEELDVCGTAIGDITSFNPIPMDMIFTTISHLPLLKELDLSYCNLSDGSIPYDLSGFSSLWFLSLRGNNFSYLPDNFVANHSKLRFLNLDNCTSLQKLPIVPQTLTRLVAHGCASLEPVFDPLQLWNFLSLDDKKMESSDLPRSVIAGSEIPPWFEYQNYVSLDREDYDLDSIISITVHIPYYYRLSEWWRIDLCFVLEYVTSDPSEETLASVNWVVLATDPSFPSYRDCVYTRTNYFHTPHLYITSLRGLQEQLRDDSNQLEIRIGTKTYVGRGRLKIRKGGCHVYCKDDVELWHRAKASIDYTSSTYTSNSSTSSTVRALSLPSALTSAETASDDAMNSRDTSLQPQFQMSSEYIIDNEKNNININIDDAMNYSRDISQPDHDLQMSNDEYIMDNEKENMCNPSDVRISQPIHPTTYHEDLQKLPLKSDDVINPSSSMPNASLSETSEIRLIRVCNKTCLCEQRAALKQIHAWLSILNVQKTMASAESSDGDHVVELIVRNSDASPTDAVAVAVADTATNEIDPLLTQAERPKINIFTVSYPRRRPRDEVTRLLETETSPLTQFMLWVWNGSRYSGLLCMTLSSIIYFLMEVLANSFSVQQIPLFETAFTRCTMILILSYVWLRRSEQPFFGTSNVRNILVTRALIGYLSLSSFIYCIQRLPFSQAILLNLTTPIMASIMARIFLHEKLNITDIAGIACSFFGVIFIFQQMLAEQGQLVKAEESSNANGKRILHIFNVLLGVFSSMTGGISYCLTRAGAKASDQPLATVFSFGLLASPASGICTFFFEDFVLPGLQSILLMLLIGVLAFFAEVLIARGLQLERTAKVANVLYMEVALSQLWGIAFLRVAPSFGPIIGCLLIFISVSCTMYIGPDKETDQP 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03085 1199 Pfam EamA-like transporter family 895 1027 IPR000620 GO:0016020|GO:0016021
Bva12g03085 1199 SUPERFAMILY "Winged helix" DNA-binding domain 4 75 IPR036390 -
Bva12g03085 1199 SUPERFAMILY L domain-like 98 436 - -
Bva12g03085 1199 Gene3D Ribonuclease Inhibitor 243 318 IPR032675 -
Bva12g03085 1199 Gene3D Ribonuclease Inhibitor 319 462 IPR032675 -
Bva12g03085 1199 Gene3D Ribonuclease Inhibitor 96 242 IPR032675 -
Bva12g03085 1199 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 245 330 - -
Bva12g03085 1199 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 245 330 IPR044974 GO:0006952
Bva12g03085 1199 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 354 448 IPR044974 GO:0006952
Bva12g03085 1199 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 256 IPR044974 GO:0006952
Bva12g03085 1199 SUPERFAMILY Multidrug resistance efflux transporter EmrE 932 1027 - -
Bva12g03085 1199 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 354 448 - -
Bva12g03085 1199 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 256 - -
Bva12g03085 1199 SUPERFAMILY Multidrug resistance efflux transporter EmrE 1103 1187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03085 Bva-Chr12 22059098 22070347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03085 1 355 WRKY Transcription Factor Family AT4G12020 34.351 4.38e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03085 - - mtr:MTR_3g080260 537.724