Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03061 ATGGCTCTTTTGGGCCGCGGTAGCAACCATGATGCTTATATTAACGATTTGGAGGAGGATATAAAGTCATTAAGGACTAAATTGAGAGAACTTGAACCCATCAGCCAAGATGTTAAGAGAAGAGTTGAGCATGACGAGGGAACGTCAAGAGATATGGAGAGGGCAAACGAAGCaatacagaaaattcaagGTGACGTTGTCAAGACACTCAAGGATGTGGAAGAACTGATTGCTTCAGGGAAGAGATGTGCCACGCGTGGACCTGTGGAGATACCTGTGGGTGACACTGTTGGGTTGGATTCTATGGTGGAGAAAGTGTGGGAAAGTATTCAAGATGAAAATGTTGGCATCGTTGGTCTGCATGGGATGGGTGGATGCGGGAAGACTATCCttctgaaaaaaattaacaatgagTTTGGAAAGAGACAACATAATTTTGATGCAATCATGTTTGTGGTGGTATCTAAAGATTATgacaatcataaaattatgaatgaaGTCCggaaaagtttaaatatttccgatgatgtttggaataaagaaaatgaagccggaagaagaagaacaatttCTCGTGTCTTGGGACAAAAAAGGTTTGTTTTGCTGTTGGACGATGTATGGGAGAAATTGAAGTTAGAAACGATGGGAGTTCCAATATCTTCAGGGAAGAataaccaatcaaaaataCTATTCACTACACGAATTGCAGATGTGTGTGACAAAATGCTTGCACAGAGAAATTTGAAAGTGCAGCTTTTGACAACAAGAGACGCGTTTCATCTGTTTCGTCAACACATAGGTGAAGAAACCTTAAACTCCCACCCTCAAACTCCAAGGATAGCAGAGGAGATCGTTCTAAAATGCAAAGGTTTGCCACTAGCACTTACTACTGTTGCAAGTGCCATGTCTGGTAAGAAAAGCATCAGAGATTGGGAAGAtgcaagaaataaattaagtaattcCCCTTGGACAGGTTTGAATTTGGAGAGGGATGTATTCTCCAGCCTCAAGTTTAGCTATGACAGGCTACCCGACGAAATGCATAAAAAGTGTTTCTTGTATTGTGCAATGTACCCTAATGATCACGGGATTTATGTTCCTACTCTGGTTGATCGGTGGATTGGAGAGGGATTTCTTGGCATTGATAGAAGCATACATGATATGTATGATCTTGGGGAATCAGTGATTAACAAGTTGAAGCTTTCGGGTTTGTTAGAGGCCGACACATATCCAGAGAAAGGTTCCAATGTTAAGATGCATGATGCGATTCGAGACATGGCACTGTGGATAGCTCATGATCAAAATCAAAGCAGATACAAGGTTCTTGTTCAAAGGGATGCGTCAACTGCATGGCGACTTGATGctgagaaaagaaaggaagtggAGAGGATTTTGCTCGATGGTAGAAATAATGAAGGTTGGCAAGTTCCGGATTGTCCTAACCTTGTGACTCTTATTGTAGGAAACTGTAAGAACTTAACAGGGATATCAAACTTTCTCCATATGACTAATTTGAAAGTGCTGGATCTTCAAAGCAATAAATGGCTTGTAGAGATCCCAAGAGAAATTGGTGCAATGGTTCACTTGGAATTTCTGAACCTTTCATTTACAGAAATTGATAGGTTGCCAATCGATTTGATGAATTTGACTAAGATGAAGGTGTTGCTGGTGGATTATGTTAAACTTCAACTGGATGATAGGGTTACTCTGGAAGTAATATCAAGCTTTGTGAGGCTAAAAGTGTTCCCGTGCAGCCGAAGGCACGGGACACAAGCCATGGATGAAAATGCAATCTTGGAGCGACTGCAGGCTCTGCTAGACCTGGAGGAACTTCATATCCACATACAAACCATCGATGGCGCTGAAAAATTGGTTCGGTTTTCGAGGTTTCTCCATTGCACAAGAAGGTTGGAACTTGACACAATCAGGGAGCCAATGGGCATGTCATTGTTGTTATCACATATGACAGCGATGGAGCATATGGAATCTCTTTATTTAGATTCGCTAATCATCGTGGAAGATTCGTCCATTAATGGCTCATACCATTTTCCCAAGCTGAAGTCCGTGCAAGTCTTGAATTGCCATTATATAACTCATCTGACATGGCTCAAATATGCTCCGGCCCTTGATTTTCTCATGCTAATAAACTGTTTGGCACTTGAAGAGATCATCAATGGACCCCTGGAAGGTCAATATCTTTCCCAAAGTGATCCGTTGTCGCGACTTCGGAGTGTCATCTTTCTGGAGCTGCCAAAGCTTAGAAGTATCCACAGGAGAGCCTTGCCTTTCCCTTCCCTTCGAATTATGACCATACAATACTGCCCAAAGCTGAGGAGGCTTCCATTTGATCAAAACTCTGCAAAAGATAGCTTGGAGGAAATTGCTGGAGAACGAAGCTGGTGGAACAATTTAGAGTGGGAGAACCCAGCTCTTAAGGACACATTCCTTCCAAAATTTAGAGCAATACTGTGCATCTTGAAGCTGGCTTCTACATGCTTTGAAGAATCAATGTGTGTACCATGTTTCCATTCTATCTCTGAATTTCGTGTGCAAAAGTGGGCAGTGGCAAACAAGGGTTTGGACACTGTCTTGACTCTGCTACCAAACAGGGGTTGTGTCTTATGGATAGGGTTTTCAGACCTCGAAACCCTACTTGTGGTCTCTTTGAATCAAGATGATTTAAACGTTGCCTTGTGGCTGTTCTCCTATGGATTGGGTTTTCTGAATTGGCTTGCTTTTAGTGCGTTCCTttgtta 2756 0.3988 MALLGRGSNHDAYINDLEEDIKSLRTKLRELEPISQDVKRRVEHDEGTSRDMERANEAIQKIQGDVVKTLKDVEELIASGKRCATRGPVEIPVGDTVGLDSMVEKVWESIQDENVGIVGLHGMGGCGKTILLKKINNEFGKRQHNFDAIMFVVVSKDYDNHKIMNEVRKSLNISDDVWNKENEAGRRRTISRVLGQKRFVLLLDDVWEKLKLETMGVPISSGKNNQSKILFTTRIADVCDKMLAQRNLKVQLLTTRDAFHLFRQHIGEETLNSHPQTPRIAEEIVLKCKGLPLALTTVASAMSGKKSIRDWEDARNKLSNSPWTGLNLERDVFSSLKFSYDRLPDEMHKKCFLYCAMYPNDHGIYVPTLVDRWIGEGFLGIDRSIHDMYDLGESVINKLKLSGLLEADTYPEKGSNVKMHDAIRDMALWIAHDQNQSRYKVLVQRDASTAWRLDAEKRKEVERILLDGRNNEGWQVPDCPNLVTLIVGNCKNLTGISNFLHMTNLKVLDLQSNKWLVEIPREIGAMVHLEFLNLSFTEIDRLPIDLMNLTKMKVLLVDYVKLQLDDRVTLEVISSFVRLKVFPCSRRHGTQAMDENAILERLQALLDLEELHIHIQTIDGAEKLVRFSRFLHCTRRLELDTIREPMGMSLLLSHMTAMEHMESLYLDSLIIVEDSSINGSYHFPKLKSVQVLNCHYITHLTWLKYAPALDFLMLINCLALEEIINGPLEGQYLSQSDPLSRLRSVIFLELPKLRSIHRRALPFPSLRIMTIQYCPKLRRLPFDQNSAKDSLEEIAGERSWWNNLEWENPALKDTFLPKFRAILCILKLASTCFEESMCVPCFHSISEFRVQKWAVANKGLDTVLTLLPNRGCVLWIGFSDLETLLVVSLNQDDLNVALWLFSYGLGFLNWLAFSAFLC 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03061 918 Gene3D Ribonuclease Inhibitor 459 857 IPR032675 -
Bva12g03061 918 PANTHER OS12G0491200 PROTEIN 15 811 - -
Bva12g03061 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 355 IPR027417 -
Bva12g03061 918 Gene3D - 253 344 IPR042197 -
Bva12g03061 918 PANTHER DISEASE RESISTANCE PROTEIN RP 15 811 IPR044974 GO:0006952
Bva12g03061 918 Gene3D - 92 248 IPR027417 -
Bva12g03061 918 Coils Coil 14 34 - -
Bva12g03061 918 Pfam NB-ARC domain 100 341 IPR002182 GO:0043531
Bva12g03061 918 SUPERFAMILY L domain-like 411 793 - -
Bva12g03061 918 PRINTS Disease resistance protein signature 193 207 - -
Bva12g03061 918 PRINTS Disease resistance protein signature 117 132 - -
Bva12g03061 918 PRINTS Disease resistance protein signature 288 302 - -
Bva12g03061 918 PRINTS Disease resistance protein signature 500 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03061 Bva-Chr12 21869617 21874102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03061 111 462 WRKY Transcription Factor Family AT5G45050 25.606 8.00e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03061 - K13459 adu:107480591 605.134