Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03060 ATGGAACCCAGAATTGggttctcctttttcttcgtCTTCTTCGCTTCAATTCTTCTCGTTTCAGAATGCAAGTGCAGCAAGGGCTGCGATTTAGCTCTAGCTTCCTACTATGTCTGGCAAGGTAACAATCTGACATACATTGCTACTGTTATGAAATCCCCGAAAGTTTCAAGCTCAGACGTCATAGTCAGCTACAACAAAGACACAGTCCCCAACAAAGACAGCGTCCAAGCCGATATTAGAGTGAATGTTCCTTTCCCTTGTGAATGCATTGATGGTGAATTTCTGGGGTATATGTTTCAGTACGATGTTAACACAGGCGACACCTATGCGTTGATTGCAAATACCAGCTATTCCAATTTGACCACTGCTGATTGGTTGCAGAATTTCAATAGCTATCCAGCAAATTCGATTCCTGATACCTCAACCCTTAATGTTACGGTTAATTGCTCGTGTGGGAATGATCAAGTTTCCAAAGATTATGGGTTGTTCATCACATACCCGCTTCGACCTGGCGATACTTTGCAATCAATTGCAAATAATGCGAGCCTTGATCCGGTGTTGCTGCAGAACTACAACCCCGGTGTGAATTTTAGTCAAGGGAGTGGTCTTGTTTATATTCCAGGCAAAGATCAAAATGGTACCTATGTGCCCCTGAAATCCAgTTCAGGAGGTCTAGCTGGTGGAGCTATTGCTGGAATTTCTGTTGGAATAATAGCTGCGCTTCTGCTATTGGCAGTTTCTATATATTATGGGTATTtcagaaagaagaagattgAGGAAATGAAATTACTCTCACAAGATTCCAAAGCGCTCTCTGTTCCCAGTAGGAGTGATGAAACCTCTGGTGGTCCTGCTGGTGGTGGTGATGCATTCATCACAGGCATAACAGTGGACAAGTCAGTTGAGTTCCCATATGAAGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGAGGTTTTGGCGCAGTCTACTATGCTGAGCTTAGAGGCGAGAAAGCTGCTATTAAGAAGATGGAAATGCAAGCATCTCGAGAATTTCTTGCTGAGCTGAAAGTCTTGACCCATGTTCATCACCTTAACCTGGTGCGTTTGATTGGATATTGTGTTGAGGGCTCTCTTTTCCTAGTCTATGAATACATTGAAAACGGAAACTTACGCCAACATCTGCGTGGTTCAGGAAGAGACCCCTTGACATGGTCTTCCCGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATATATTCACGAACATACAGTGCCTGTCTACATCCACCGTGACATAAAgtctgaaaatatattaatagacAAAAACTTCCATGCAAAGGTTGCAGATTTTGGATTGACCAAACTGACTGAAGTTGGAAGCTCATCCCTTCCAACTGGTCGTCTTGTGGGAACGTTTGGATACATGCCACCAGAATATGCTCAATATGGCGATGTTTCTCCCAAGGTAGATGTCTACGCTTTTGGAGTTGTTATTTATGAACTTATTTCAGCTAAAGAAGCTATTATCAAGATAGAAGAATCTATTCCTGACTCAAGGGGTCTTGTAGCTATGTTTGAAGGAGTTCTTAATCAGCCTGAACCTATAGAAGATCTTCGCAAAGTCGTGGATCCGAGGCTTGGAGATAATTATCCCATTGATTCAGTCTACAGGATGGCACAACTGGCGAAAGCGTGTACACACGACAATCCACAACTACGTCCAAGTATGAGATCCATTGTGGTTGCTCTGATGACACTTTCTTCCAACACTGATGACTGGGATGTTGGCACCTTCTATGAAAATCAAGAACTTGTGAATCTTATGTCAGGAAGATA 1847 0.4169 MEPRIGFSFFFVFFASILLVSECKCSKGCDLALASYYVWQGNNLTYIATVMKSPKVSSSDVIVSYNKDTVPNKDSVQADIRVNVPFPCECIDGEFLGYMFQYDVNTGDTYALIANTSYSNLTTADWLQNFNSYPANSIPDTSTLNVTVNCSCGNDQVSKDYGLFITYPLRPGDTLQSIANNASLDPVLLQNYNPGVNFSQGSGLVYIPGKDQNGTYVPLKSSSGGLAGGAIAGISVGIIAALLLLAVSIYYGYFRKKKIEEMKLLSQDSKALSVPSRSDETSGGPAGGGDAFITGITVDKSVEFPYEELANATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMEMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLRQHLRGSGRDPLTWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSENILIDKNFHAKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVIYELISAKEAIIKIEESIPDSRGLVAMFEGVLNQPEPIEDLRKVVDPRLGDNYPIDSVYRMAQLAKACTHDNPQLRPSMRSIVVALMTLSSNTDDWDVGTFYENQELVNLMSGR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03060 615 Pfam Protein tyrosine and serine/threonine kinase 318 586 IPR001245 GO:0004672|GO:0006468
Bva12g03060 615 Gene3D Phosphorylase Kinase; domain 1 296 386 - -
Bva12g03060 615 ProSiteProfiles Protein kinase domain profile. 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03060 615 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 6 615 - -
Bva12g03060 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Bva12g03060 615 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 615 IPR044812 GO:0019199|GO:0045087
Bva12g03060 615 SUPERFAMILY Protein kinase-like (PK-like) 297 587 IPR011009 -
Bva12g03060 615 SMART serkin_6 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03060 615 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bva12g03060 615 Gene3D Transferase(Phosphotransferase) domain 1 387 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03060 Bva-Chr12 21858790 21865339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03060 7 615 Receptor kinase-like Gene Family AT3G21630 59.551 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva12g03060 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03060 - K13429 gmx:100777781 852.432