Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03058 ATGCCTTCGGTATTCTCAATCCTTCACTTCTTCCTAATTGGCTTCTTCCTCATGATTTCACCAACCAAAACAATTTCCATATCCCCCAACTGCAGCAACAGCACTTTTACTCCGAATAGCACTTACCACTTCAACTTGAATACCCTTTTATCATCTCTCTCCTCCACCGCTTCCGGGCAAGCCAGCCGGTTCAACACCACCGTGGCCGGCGGCTCGGGCAAACGGGACACCGTCTACGGCCTTTTTATGTGTAGTGGAGTTGCCAACCTTCAGCAATGCAGTGACTGCGTGGCGGACGCAACTAGAAAAATTGCTTCAGCGTGTCCCTTCAAAAAAGAAGCTTTAATCTGGTCGCTTGATTGCTTAGTTCGCTACTCGAACTGGCCTTTCTTTGCGGCCATGGATGAAAGACCCAAGCAGTGTGTCCCGAACAAGGAGGATTACAGGggtgaatttgaaaaattcaacaGTGCCCTGAAATCTATGATGGGCGATCTCATAACACGAGCAAGCTTAAAGAAACTTGctgtaaagaaaaaatctttacCTGGGGACAAAGTGTTGTTTGGCCAAGCTGAGTGCATCCCTGATCTTTCTCGGGAAAATTGCAGTAAGTGCCTCAAAGATGCTGCTGATGAACTTCAGAACACTTGTGGTAAAGGCAAGATAGGAGGAAGAGTTTTTTATCCAAGCTGTATGATTAGATATGAACCATATATCTTTTTCTCATCTGATCTTCTTGAAGgaaaaggaaaaatctcaTATGTAGTTCTTATCCCGACTGTCCTTGGAATTGTTACTTTGGTGGTCGTTTTGTATTGTGGGTATCGTTTACTATGTAGGAAAAGAGGGAAGATCAATCTCAAGGATCAGAAAGGAAATTttGGAGAAGATATCAGTAATGAGCTGAAGTCCTTGCAATTTGACTTGGCTACAATTGAAGCTGCTACAAACAAATTTTCTGATGAGAATAAGATAGGGGAAGGTGGTTTTGGACCAGTTTATAAGggtATGCTCTCTAATGGGCAAGAAATAGCAATTATTGATTTGGATGAAAGGCAAGGAAATACAAGGAGAATTGCTGGCACATATGGCTACATGTCTCAAGAATATGCAATGCATGgcttattttcaataaaatctgACGTGTTTAGCTTTGGAGTCATGATCCTAGAGATCATTAGCGGGAAGAGAAATGCTTATTTTGATGATCCAAACTCTTCCGGTGACCTCTTGAGCTACGCTTGGAACCTGTGGACAGAAAAAAGACCACTGGCACTGTTGGATCCTACATTAGAAGAAACAATTTCTGAAACCGAAGTCATCAGATGCATTCAAGTTGGCTTACTATGTGTTCAAGAAAACCCAGATGACAGACCAACAATGGCAACAATTGCtctatattttagtttcatgGTGGATCTGCCATCACCTTCAGAGCCACCACTTTGCCTGCTTGGGAAACCAAAGTCAACGGCGCGCATGGAAGAGTTAGAGTCTATTAAGTCCATGTCCCATTCGATATCATCGTCTGCTAGCGATGTGTCTAAGAGTAAATCCTTCCCTCGATA 1571 0.4106 MPSVFSILHFFLIGFFLMISPTKTISISPNCSNSTFTPNSTYHFNLNTLLSSLSSTASGQASRFNTTVAGGSGKRDTVYGLFMCSGVANLQQCSDCVADATRKIASACPFKKEALIWSLDCLVRYSNWPFFAAMDERPKQCVPNKEDYRGEFEKFNSALKSMMGDLITRASLKKLAVKKKSLPGDKVLFGQAECIPDLSRENCSKCLKDAADELQNTCGKGKIGGRVFYPSCMIRYEPYIFFSSDLLEGKGKISYVVLIPTVLGIVTLVVVLYCGYRLLCRKRGKINLKDQKGNFGEDISNELKSLQFDLATIEAATNKFSDENKIGEGGFGPVYKGMLSNGQEIAIIDLDERQGNTRRIAGTYGYMSQEYAMHGLFSIKSDVFSFGVMILEIISGKRNAYFDDPNSSGDLLSYAWNLWTEKRPLALLDPTLEETISETEVIRCIQVGLLCVQENPDDRPTMATIALYFSFMVDLPSPSEPPLCLLGKPKSTARMEELESIKSMSHSISSSASDVSKSKSFPR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03058 523 Pfam Protein tyrosine and serine/threonine kinase 362 466 IPR001245 GO:0004672|GO:0006468
Bva12g03058 523 MobiDBLite consensus disorder prediction 502 523 - -
Bva12g03058 523 ProSiteProfiles Gnk2-homologous domain profile. 24 130 IPR002902 -
Bva12g03058 523 Pfam Salt stress response/antifungal 31 127 IPR002902 -
Bva12g03058 523 Pfam Salt stress response/antifungal 146 238 IPR002902 -
Bva12g03058 523 Gene3D Transferase(Phosphotransferase) domain 1 298 474 - -
Bva12g03058 523 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Bva12g03058 523 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 347 513 - -
Bva12g03058 523 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 250 347 - -
Bva12g03058 523 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 23 245 - -
Bva12g03058 523 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 347 513 - -
Bva12g03058 523 MobiDBLite consensus disorder prediction 501 523 - -
Bva12g03058 523 Gene3D - 139 241 IPR038408 -
Bva12g03058 523 Gene3D - 23 130 IPR038408 -
Bva12g03058 523 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 250 347 - -
Bva12g03058 523 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 245 - -
Bva12g03058 523 SUPERFAMILY Protein kinase-like (PK-like) 356 484 IPR011009 -
Bva12g03058 523 SUPERFAMILY Protein kinase-like (PK-like) 301 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03058 Bva-Chr12 21845003 21848160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03058 347 478 Receptor kinase-like Gene Family AT4G05200 51.880 5.94e-41 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva12g03058 PK_Tyr_Ser-Thr 2.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03058 - - lja:Lj6g3v1055620.2 298.516