Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03053 ATGTTTGAAGGATGGAATGCTCTTTTGATAGCTAAGGCGAATCAAATCAAGTTCTCGAATAGTTGGCACCGTTTGCTGTCTGATTACGAATGGTTTGCCTCTGCATTTGCTGCAGCAACAATGTCGGATGATATGCTTATTCATTTCTCTTCCAACTCCTCCAACCAGTCGGACCAGTCTCTGCCTACTAAGATTGCAAAGCTTGAAGCTCGCATGGTTGGTAAGGCATCCTCCGTAGCTGCTGCTGTACCATCCACTCAGCAGTCAACTCGATCCTCTGTTCCTTTAGCTGTGAAATTCGGAGGTGCCACCAAGGACTTGACTTCATTATCCAGTTCGAGTGATTCTGACGACGATAATGGTGGAGAGTTCCTGATACAAGCCAACACACAAAAGCGCCAAAAGCTTAATGGCGATGATGACTCTAATATTTTTGAACGTATTGAGgTTGTTAATGATGGGAGGCAAGCTGGTTTTGAGGCTGTGGAGACCAAAAGTAACCTTGATgtcaataagaaaaaacatgGTCGTGGAAGAGGAAATTCAAGTTCAGGTAGGGGGCGTGGATCTAGAGTTATTGATCAGAGCAGACTGCAAACATCTCCTGCAACAGTTTTGGCTTCAAATGGTCAGCTTGAGAAGGATAGCAGACTCAAAGATCAGTTTCGTAATGACAACTGTGCATTATTAGAGGAGGAGATTGCATCTTTACGTGCCAAAGTTGTTGCACTAGAGGAGGACTTGCGTAAGTCAAAACAAGAAGCCTCTGATTATCAGAGTCTTTGTCGCCAGTTAGAAAAGGAATTGAAGGATATGAAAGATCTTGAACAGCAAATGAAGCCTAAGCGAACAAAAATAGTTTCTGATTTGCTTATAGCAGTTTCAAAGGCTGAGAGGCAAGAAGCAAGGCTGAAAGTACGACAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTTATATCTGAGACCTGGGAAGATGGGCAAGCATTAAAGGATCTTAATGCCCAACTTAGACAACTGATAGAAACAAAGGAGGCTATTGAGCGGCAGCGcaaattattgaagaaaaaacaatctGATAAGGGAGATGGAACTGATGCAGAGACTGGATTACAAGAAGACGATGCTCTTATTCAGGATGAGATTTATAAGTCTAGAATAGCTAGTATTAAGCGAgaagaagaaattattttacgGGAGAGGGATCGCTATGAAATAGAAAAGGGAAGGCTAATACGAGAAATGAAACGCATACGTGACGAGGATGGTTCTCGTTTTAACAACTTTCAGATTCTAAATCATCGTTATGCGCTTCTAAACCTTCTTGGAAAAGGGGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGATCATAGATATGTTGCATGTAAACTTCATGGTTTAAACGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTATATACGGCATGCAATTCGGGAGTATAATATTCACAAGACCCTGGTGCATCATCACATTGTTCGTTTATGGGATACCTTTGAGATTGACCAAAATACTTTTTGTACTGTTCTAGAGTACTGTAGTGGAAAAGATCTTGATGCTGTTCTTAAAGCAACGCCTATATTGCCTGAGAGGGAGGCTAGGGTCATTCTGGTTCAGATTTTTCAAGGCCTTGTTTATTTGAACAAAAGAACTCAGAAGATTATCCATTATGATCTAAAGCCTGGAAATGTTCTGTTTGATGAGCTTGGTGTTGCCAAAGTAACTGATTTTGGTCTTAGCAAGATAGTGGAGGATGATGTTGGATCCCAGGGAATGGAACTTACATCCCAGGGAGCTGGAACGTATTGGTATTTGCCTCCTGAATGTTTTGAGCTCACTAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCCGGTGTTCTGTTCTATCAAATGCTATTTGGCAAGCGTCCTTTTGGGCATGACCAAAGCCAAGAACGAATACTTCGTGAAGACACAATTATAAAGGCACGCAAGGTTGAATTCCCTGCTAAGCCTTCTGTTTCTAATGAGGCAAAAGATTTTATTCGCCGGTGTCTAACTTATAATCAGGCCGAGAGACCGGATGTGCTAACCATTGCTCAAGATCCATATCTCACATACTCAAAGAAATG 2159 0.409 MFEGWNALLIAKANQIKFSNSWHRLLSDYEWFASAFAAATMSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKASSVAAAVPSTQQSTRSSVPLAVKFGGATKDLTSLSSSSDSDDDNGGEFLIQANTQKRQKLNGDDDSNIFERIEVVNDGRQAGFEAVETKSNLDVNKKKHGRGRGNSSSGRGRGSRVIDQSRLQTSPATVLASNGQLEKDSRLKDQFRNDNCALLEEEIASLRAKVVALEEDLRKSKQEASDYQSLCRQLEKELKDMKDLEQQMKPKRTKIVSDLLIAVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLRQLIETKEAIERQRKLLKKKQSDKGDGTDAETGLQEDDALIQDEIYKSRIASIKREEEIILRERDRYEIEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDTFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQIFQGLVYLNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELTKTPLISSKVDVWSAGVLFYQMLFGKRPFGHDQSQERILREDTIIKARKVEFPAKPSVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKK 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03053 719 Coils Coil 335 365 - -
Bva12g03053 719 PANTHER BNAC09G36930D PROTEIN 41 719 - -
Bva12g03053 719 CDD STKc_TLK 440 713 - -
Bva12g03053 719 ProSitePatterns Protein kinases ATP-binding region signature. 447 470 IPR017441 GO:0005524
Bva12g03053 719 Pfam Protein kinase domain 442 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03053 719 Coils Coil 406 426 - -
Bva12g03053 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Bva12g03053 719 MobiDBLite consensus disorder prediction 162 203 - -
Bva12g03053 719 ProSiteProfiles Protein kinase domain profile. 441 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03053 719 SMART serkin_6 441 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g03053 719 PANTHER MIXED LINEAGE PROTEIN KINASE 41 719 - -
Bva12g03053 719 SUPERFAMILY Protein kinase-like (PK-like) 433 715 IPR011009 -
Bva12g03053 719 Coils Coil 227 278 - -
Bva12g03053 719 MobiDBLite consensus disorder prediction 183 203 - -
Bva12g03053 719 Gene3D Transferase(Phosphotransferase) domain 1 432 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03053 Bva-Chr12 21803086 21813231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03053 424 719 MAP Kinase Kinase Kinase AT3G13530 27.759 8.61e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Bva12g03053 Pkinase 3.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03053 K08864 - gmx:100805168 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g03053 12 21803086 21813231 Bva12g03053 12 21803086 21813231 ECH