Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03026 ATGCCTCCTGTTGGTTATCGATTCCGCCCAACCCCAGAAGAACTCATCCATCACTACCTCCAAAAAAAGGTGAATGGAGAGGCTTTACCATTCGAAGCTGTAAACGATTTGGATCCATTTCAGAGTGATCCTTGGAAGTTGTTTGATGAAAAATCTAATGAATACTTCTATGTTTTCACCAAGATGAAGGTGAAAGACATCGCGTGGAAAGAAAAAACGGTTGGTTCTGGCACTTGGGTGTTCCTAGATTGCAAGGAGATCAGAAAAGACATGGATCCTATTATTGGTTATGATAGAGAATTCAAACTCGTGTTGACAGGTGATGGAGAAGCTTATGGAAATTGGGTTATGCACCAATTCTCTTTGCTTGATGATGCTTATGGTGGAGATGAAGAGGTGAGTTTGTTGATGAGCTTATTTGAATCTgaaattttgaacaaaaatttacaCTGCTGTGCTTTGTTCATCTCATGGTCATG 479 0.3904 MPPVGYRFRPTPEELIHHYLQKKVNGEALPFEAVNDLDPFQSDPWKLFDEKSNEYFYVFTKMKVKDIAWKEKTVGSGTWVFLDCKEIRKDMDPIIGYDREFKLVLTGDGEAYGNWVMHQFSLLDDAYGGDEEAEVYVVCQFRNLDMDIDDDQ 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03026 152 ProSiteProfiles NAC domain profile. 2 144 IPR003441 GO:0003677|GO:0006355
Bva12g03026 152 PANTHER - 6 140 - -
Bva12g03026 152 Pfam No apical meristem (NAM) protein 3 122 IPR003441 GO:0003677|GO:0006355
Bva12g03026 152 PANTHER NAC TRANSCRIPTION FACTOR 56 6 140 - -
Bva12g03026 152 Gene3D NAC domain 11 146 IPR036093 GO:0003677|GO:0006355
Bva12g03026 152 SUPERFAMILY NAC domain 3 140 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03026 Bva-Chr12 21602859 21605543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g03026 3 141 NAC Transcription Factor Family AT3G04070 28.736 7.13e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva12g03026 NAM 1.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03026 - - dzi:111279429 104.375