Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g03021 ATGGATGTTCAAGTTATCAATGTGGAAGACGGAAGGGACCAGCAAGCTGGGGCAGATGATGGAGATGCTGATCCAAGTGAAGGTGAAGTTAACAATTCTGAAAATTCAGGGTCTCATGTTGAAGACAGGATTTCTGAGCCTTATATTGGTATGCAATTTGATTCAGAAGATGCTGCAAAGAGATTTTATGATGAATATGCCAGACGTGTGGGTTTCAGCTCTAAAGTTGGTGCACAGGGTCGTTCTAAAGATGACCTAGCAAATGTGTATAGGGAGTTTGTGTGTGGAAGGGAAGGTTTGAAAAGAAGATATACTGATAGCTGTGATGCAATGATTAGGTTAgagcaaaagaataaaaaatgggTTGTAACAAAGTTTGTGAAGGAGCATAGCCATTCCATGGTGAGTCCCCATAAGGTGCATCATCTCCGTCCACGCAAGCATTTTTCTAGTGTTGGAAGGACCATGCCTGAAACATACCAGGGTGTGGGACTTGTTCCAAGTGGTGTCATGTACACATTGGATGGTAATCGTCTTTCTACTGAGAATAATTGTGGAACTAGGAATACTCCTCCGCCACCTCCTCCTTCAGTAGAACCAAGTCACCCTATTAAGAATCCTACAACAGTTAAGAATCCTACATTGGTAAATTACAGTGTAGCGCGAACTTTTCGAAAAAGGACTTTAGGGAGGGATGCTCAGAATCTGTTGGAGTATTTCAAGAAAATGCAGGCTGAGAACCCCGGTTTCTTCTATGCGATACAACTTGATGAAGATGGTCGTATGTCTAATGTATTTTGGGCAGATGCAAGATCAAGGACAGCTTACAGTCATTTTGGCGATACAGTTACTCTGGACACAACTTTTAGAGTAAACCAATACATAGTGCCATATGCTCCATTTACTGGGGTGAACCATCATGGTCAGATGATATTGTTTGGTTGTGCTCTCcttttggatgattctgaGGCGTCTTTTTTGTGGCTCCTTAAGACATTTCTGACAGCAATGAATGATCGCCATCCTGCATCTATAACTACTGATCAAGACAGAGCTCTACAGTCAGCAGTTTCTAAGGTTTTTCCTCAAGCTCGTCACTGTATAAGCAAGTGGCATGTCTTGCGGGAAGGGCAGGAAAAGCTGGCCCATGTATGTCATGCACATCCAAATTTTCAAGTTGAactttataattgtattaaccTGACAGAAACGATTGAGGAGTTTGAGTCATCTTGGAATACTATCCTTGATAAATATGAACTTAGGAGACATGATTGGCTTCAGTCATTGTATAATGCTCGTGCACAATGGGTTCCAGCATATTTCCGTGGTTCTTTTTTTGCTGCGATATCTCCTAATCAAGGATTTGATGGCTCTTTCTTTGATGGTTATGTCAACCATCAAACAACATTACCTATGTTCTTTAGGCAGTATGAAAGAGCTCTAGAGAACTGgttcgaaaaagaaaaagaatcagaTTTTGAGACTCTTTGCACAACACCAGATTTGAAGACACCTTCTCCCATGGAGAAACAAGCTGCTAATCTttatacaagaaaatttttttcaaagtttcaagAAGAGCTAGTTGAAACTTTTGTTTACACTGCCAATAGAATTGAAGGTGATGCAGCTAATAGCACTTTCAGAGTTGCAAAATTTGAGGATGACCGAAAAGCATACATTGTAACATTAAGTTATCCTGAGTTGAGAGCTGACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTGTGTAGGCATGTTTTAACTGTTTTCACTGTGACAAATGTACTTACATTACCATCACATTACATCTTAAAACGATGGACAAGAAATGCAAAAAGTGGAGTTGGGTCAGACGAACATCCTGGTGAATCACATGGACTGGAGTCTCTGACATCAAGGTATAACAATCTATGTCGGGAAGGCATTAGATATGCCGAGGAAGGAGCAATAGCTCTGGACACCTATAATGTTGCAATGGGTGCTCTTAAAGAAGGCGTGAAGAAGGTTGCTGCTGTGAAGAAAAATGTTGCCAAAGTTGCAACTCCTAATAATCAAGGTGGCAGGACAGTTTATGATGACAAGAAAACCACTCCATCATCTTCAGATAGAACCCCTCTTTTATGGCCACAGCAAGATGAAATTACCAGAAGGTTTAATCTCAATGATGCTGGTGTTCCTGTTCAATCAGTTGCTGATCTGAATTTGCCACGAATGGCCCCAGTGTCTCTTCATCGAGATGATGGTCCGCCTGAAAATATGGTGGTTCTTCCATGCCTGAAATCAATGACTTGGGTGATGGAGAACAAAAACTCTACTCCAGGAAATAGAGTAGCTGTTATCAATCTGAAGTTGCAAGATTATAGCAGAACTCAATCACCAGAATTCGAGGTTAAGTTTCAACTCTCAAGAGTTTCTTTGGAACCAATGTTAAAGTCTATGGCTTACATCAGTGAACAACTCTCTACACCAGCTAATAAGGTTGCGGTAATAAATCTTAAGCTTCAAGATTCCGAGACAACATCTGGGGAGTCTGATGTAAAGTTTCAAGTCTCCAGGGATACGTTGGGCGCTATGTTGCGCTCAATGGCCTATATTCGCGAGCAACTTTCTCATGCTGGTGATACGCAACCAGAGCCGCCATTGAAAAGGCATAGGAAGTA 2669 0.3994 MDVQVINVEDGRDQQAGADDGDADPSEGEVNNSENSGSHVEDRISEPYIGMQFDSEDAAKRFYDEYARRVGFSSKVGAQGRSKDDLANVYREFVCGREGLKRRYTDSCDAMIRLEQKNKKWVVTKFVKEHSHSMVSPHKVHHLRPRKHFSSVGRTMPETYQGVGLVPSGVMYTLDGNRLSTENNCGTRNTPPPPPPSVEPSHPIKNPTTVKNPTLVNYSVARTFRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEDGRMSNVFWADARSRTAYSHFGDTVTLDTTFRVNQYIVPYAPFTGVNHHGQMILFGCALLLDDSEASFLWLLKTFLTAMNDRHPASITTDQDRALQSAVSKVFPQARHCISKWHVLREGQEKLAHVCHAHPNFQVELYNCINLTETIEEFESSWNTILDKYELRRHDWLQSLYNARAQWVPAYFRGSFFAAISPNQGFDGSFFDGYVNHQTTLPMFFRQYERALENWFEKEKESDFETLCTTPDLKTPSPMEKQAANLYTRKFFSKFQEELVETFVYTANRIEGDAANSTFRVAKFEDDRKAYIVTLSYPELRADCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSGVGSDEHPGESHGLESLTSRYNNLCREGIRYAEEGAIALDTYNVAMGALKEGVKKVAAVKKNVAKVATPNNQGGRTVYDDKKTTPSSSDRTPLLWPQQDEITRRFNLNDAGVPVQSVADLNLPRMAPVSLHRDDGPPENMVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTQSPEFEVKFQLSRVSLEPMLKSMAYISEQLSTPANKVAVINLKLQDSETTSGESDVKFQVSRDTLGAMLRSMAYIREQLSHAGDTQPEPPLKRHRK 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g03021 889 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 814 IPR031052 GO:0006355
Bva12g03021 889 MobiDBLite consensus disorder prediction 178 211 - -
Bva12g03021 889 Pfam SWIM zinc finger 566 595 IPR007527 GO:0008270
Bva12g03021 889 MobiDBLite consensus disorder prediction 188 202 - -
Bva12g03021 889 Pfam MULE transposase domain 283 374 IPR018289 -
Bva12g03021 889 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Bva12g03021 889 ProSiteProfiles Zinc finger SWIM-type profile. 561 597 IPR007527 GO:0008270
Bva12g03021 889 MobiDBLite consensus disorder prediction 686 707 - -
Bva12g03021 889 MobiDBLite consensus disorder prediction 1 44 - -
Bva12g03021 889 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 35 814 - -
Bva12g03021 889 SMART 26again6 572 599 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g03021 Bva-Chr12 21560560 21566218 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva12g03021 MULE 1.2e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g03021 - - gmx:100786516 1389.02