Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02992 atggaGGATTTGAGACTGAGTAAATCGATGTGGGtgatggtgatgatgatgGTTATAGTGGTGAAATTGGGAAAATCTGAATTGATTTATGTGGGAGGAGGCAAGGCTAGTTGGAAACCTAATGTTAACTTAACTGAATGGGCAAGTCACGAGCAATTTTATGTGGGCGATTGGCTAtACTTTGGATTCGATGTGGACATGTACAATGTGCTGGAGGTGAACAAGACAAGCTACGAGAACTGCATAGAGACAGGGTTCATCAAGAACATAACAAAGGGTGGCAGAGACGTGTTTTTATTGGAAGAGGCAATGCCCTATTACTTCATCAGTGGACGAGGTTCCTGTTGGAGTGGGATGAAGGTTGCTATCAGTGTTGAAAATGCTACAGCACCACCTGCTCCAGCACCTGTGCAGCACAAGAGTGGTGGTTCTGTTTTAGATAATGGCATTCTGGTTCGCCCGACACTTGTGCTGCTGGTCTCAACCTTGGTGTGGAGCATCATCTTCAAATG 512 0.4336 MEDLRLSKSMWVMVMMMVIVVKLGKSELIYVGGGKASWKPNVNLTEWASHEQFYVGDWLYFGFDVDMYNVLEVNKTSYENCIETGFIKNITKGGRDVFLLEEAMPYYFISGRGSCWSGMKVAISVENATAPPAPAPVQHKSGGSVLDNGILVRPTLVLLVSTLVWSIIFK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02992 170 Gene3D - 29 135 IPR008972 -
Bva12g02992 170 ProSiteProfiles Phytocyanin domain profile. 27 127 IPR003245 GO:0009055
Bva12g02992 170 PANTHER EARLY NODULIN-LIKE PROTEIN 20 10 132 - -
Bva12g02992 170 PANTHER BLUE COPPER PROTEIN 10 132 IPR039391 GO:0009055
Bva12g02992 170 Pfam Plastocyanin-like domain 38 119 IPR003245 GO:0009055
Bva12g02992 170 SUPERFAMILY Cupredoxins 30 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02992 Bva-Chr12 21385540 21387110 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02992 10 146 Phytocyanin Superfamily AT2G27035 51.095 1.31e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02992 - - qlo:115982539 181.415