Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02987 ATGGGGATTCAAACAATGGGTTCTCAAGGTAATGAACAGCAATCTCATTTACAGTCTTCCCCTTTAGCAATGCAAGACTCATGGTATAACCTCACTCTTGATGAGGTTAAAAATCAACTAGGAGATATGGGGAAACCATTGGGGAGCATGAATCTTGATGAACTTCTTGAAAATGTATGGACTACTGAAGCAAGTAAATCTGTAGGGATAGAGAATAAGAACATGTcctcttcatcttctcttcaacGTCAAGCCAGTCTGACCTTGGCTAGGGCTTTAAGTGGTAAAACAGTTGACGATGTCTGGAGAGAAATCCAACAAGGTCAGAAGAAACGGTATGGAGAAAACATGCAAAATCAGGATAGAGAAATGACTCTTGGTGAGACAACTTTAGAGGACTTCTTGGTTCAAGCTGGGCTTTTTGCCGAAGCTTCCATAAGTCCAGCTGTGGCATTGGATGCAAATACAATGGATGCCATGACCCCTCAAAGTTCTCAACAAAAAATGGGCTTATCACCCTCCACTTCAATTGGTAGTTTATCAGACTCAAGACCTGGCCGGAAAAGAGATGCTCCATATGTATATGAGAAAACACTGGAGAGGAGGCTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGTTCACGGGCCAGAAAACAGGCTTACCATAATGAACTGGTTAGCAAGGTTTCTCGTCTagaagaagataatataaagctcaagaaagaaaagGAATTTGACGAGAAGTTGCCATCTGAACCAAAATATCAGCTTCGAAGAACAAGTTCCGCCTCGTTCTG 803 0.3985 MGIQTMGSQGNEQQSHLQSSPLAMQDSWYNLTLDEVKNQLGDMGKPLGSMNLDELLENVWTTEASKSVGIENKNMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGENMQNQDREMTLGETTLEDFLVQAGLFAEASISPAVALDANTMDAMTPQSSQQKMGLSPSTSIGSLSDSRPGRKRDAPYVYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEDNIKLKKEKEFDEKLPSEPKYQLRRTSSASF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02987 267 SUPERFAMILY Leucine zipper domain 201 248 IPR046347 GO:0003700|GO:0006355
Bva12g02987 267 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g02987 267 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Bva12g02987 267 MobiDBLite consensus disorder prediction 159 182 - -
Bva12g02987 267 CDD bZIP_plant_BZIP46 201 246 - -
Bva12g02987 267 MobiDBLite consensus disorder prediction 159 192 - -
Bva12g02987 267 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Bva12g02987 267 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Bva12g02987 267 Gene3D - 199 251 - -
Bva12g02987 267 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 36 264 IPR043452 GO:0003700|GO:0045893
Bva12g02987 267 Pfam bZIP transcription factor 201 246 IPR004827 GO:0003700|GO:0006355
Bva12g02987 267 MobiDBLite consensus disorder prediction 248 267 - -
Bva12g02987 267 Coils Coil 224 251 - -
Bva12g02987 267 PANTHER BZIP TRANSCRIPTION FACTOR 36 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02987 Bva-Chr12 21358338 21362488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02987 18 267 bZIP Transcription Factor Family AT3G56850 46.392 1.07e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g02987 bZIP_1 2.7e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02987 12 21358338 21362488 Bva12g02987 12 21358338 21362488 ECH