Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02977 ATGGCTATTGCGACCCCTGGGCAGCTCTACGTCAATGAATCCCCTTCGTGGGGATCCAGAAGTGTTGATTGCTTCGAAAAGTTAGAGCAGATTGGCGAGGGAACTTATGGGTGTCGTTTGGTTATACTTATGGACAGCAACTTATGTTTGATCATGTTATCGTTCTTGTTTTTTGGGGTTGACATGGAAGCCTTTTTATGTATCTTTCAAGTGTACATGGCTAAAGAAATCAGAACAGGTGAAATTGTTGCTCTGAAGAAAATTCGAATGGACAATGAGAGAGAAGGGTTCCCTATTACTGCTATACgtgaaatcaaaattcttaaaaagctTCACCATGATAATGTGATCAAGCTGAAAGAAATTGTGACATCACCAGGCCCTGAGAAAGATGAACAAGGGAGGCCAGATGGTAACAAGTATAAAGGTGGCATATATATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGGGATGAGATTTACAGTCCCCCAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTGCACTATTGTCATGTAAATCAAGTACTTCACCGTGATATCAAAGGCTCTAATCTTCTTATAGACAATGAAGGTAATCTGAAGCTTGCAGATTTTGGACTTGCACGGTCATTTTCTAATGACCACAACGCAAATCTTACAAATCGTGTCATTACATTATGGTACAGGCCCCCAGAGTTGCTGTTAGGGACAACAAAGTATGGGCCTGCTGTTGATATGTGGTCTGTGGGGTGTATTTTTGCTGAGCTTCTCCATGGAAAGCCTATCTTCCCTGGAAAAGATGAGCCagaacaattaaataaaatttttgagctATGTGGAGCACCAGATGAGTTGAACTGGCCTGGAGTTTCTAAGATCCCTTGGTATAATCAATTCAAACCAACAAGACCAATGAAAAGACGATTGAGGGAAGTTTTCAGACACTTTGAACGTCACGCTTTGGAGTTACTGGAGAAGATGCTTACACTTGATCCTGCCCAGAGAATAACTGCTAAGGATGCACTTGATGCTGAATATTTCTGGACTGATCCATTACCATGTGATCCCAAGAGCTTACCCAAGTACGAGTCATCACATGAgtttcaaacaaagaaaaagcgCCAGCAACAACGGCAACACGAAGAAAATGCTAAGCGTCAGAAAATGCAGCACCCACAGCAGCACACTCGTCTTCCCCCAATTCAGCAATCTGGGCAACCACATGCCCAGATGCGACCAGGACCAAACCAACCAATGGCCCCGGTTGGCGCAGGACCTAGCCATCATTACGGAAAGCCTCGAGGTCCCTCCGGTGGCCCAGGAAGATACCCTCCTAGTGGGAATCCTGGTGGAGGATATAACCACCCAAACCGCGGTGGTCAAGGTGGAGGTGGTGGTTATGGTAGCGGGCCATATCCTCCACAAGGGCGGGGTGCCCCTTATGGGTCTGGTGGTATGCCTGGTGCTGGTCCTCGAGGTGGCGGCGGTAGTGGTTATGGAGTTGGAGCTCCAAATTATGGGCAAGGCGGTCCATATGGCGGGTCTGCAGCTGGTCGTGGCTCTAACATGATGGGCGGAAACCGCAATCAACAGTATGGTTGGCAGCAATA 1637 0.4508 MAIATPGQLYVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHDNVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDELNWPGVSKIPWYNQFKPTRPMKRRLREVFRHFERHALELLEKMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEENAKRQKMQHPQQHTRLPPIQQSGQPHAQMRPGPNQPMAPVGAGPSHHYGKPRGPSGGPGRYPPSGNPGGGYNHPNRGGQGGGGGYGSGPYPPQGRGAPYGSGGMPGAGPRGGGGSGYGVGAPNYGQGGPYGGSAAGRGSNMMGGNRNQQYGWQQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02977 513 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Bva12g02977 513 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02977 513 MobiDBLite consensus disorder prediction 335 513 - -
Bva12g02977 513 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02977 513 CDD STKc_CDK9_like 25 324 - -
Bva12g02977 513 MobiDBLite consensus disorder prediction 370 388 - -
Bva12g02977 513 MobiDBLite consensus disorder prediction 337 366 - -
Bva12g02977 513 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Bva12g02977 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bva12g02977 513 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Bva12g02977 513 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Bva12g02977 513 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02977 513 MobiDBLite consensus disorder prediction 499 513 - -
Bva12g02977 513 PANTHER CELL DIVISION PROTEIN KINASE 5 450 - -
Bva12g02977 513 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02977 Bva-Chr12 21282934 21289160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02977 1 513 Core Cell Cycle Gene Families AT5G10270 77.969 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva12g02977 Pkinase 7.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02977 K08819 - mnt:21403150 846.654