Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02967 ATGGAAGCAGAGAGTGTGGTGGTGATCCTGGATGCAGCCAGTGAAGTTGATACAACTGTGTTTATTTGGGCTTTGAACAAGTTACCACTTAAACCAAGAGACAAGCTCACCTTGCTTCTAGTTCTTAATCAAATTACTAATCCCATGGGGTACAAAATGTTCGTCAATCAGACGTCAATGTTGGGAGCTAACAAGAGTATCATTGAGGAAGAAGCTGCAATGAGGATGGAAATGTATCAAAACCATGAGGAAATTGTTAAGATCGTTGAAATGTATGAATCAAAGGAGGTTGAATTTAGTATCCAGTTGATCATAGGACCTAAGGAGGATACTCTAGAGACAGTCAAAGAGCTAAAGTCAACTTGGGTGATAATTGACAGgaaaatgaagaaagatggCGAATTTTTCCTCAAGAATCTTTCTTGTGATATTTCAAGACTGAAGCGTGACAAGAAGATTGAACATTTAAGAGTACCACCAGAAAGCATTCCCCAAGAATATAATAGTCGAGAAACATATAATGACAGCACCCACGGTTGTGGAGAGAGCTTGGACACTTTACCTGAGAGTCCAATGGCCAAGAAATATAGCAGTCCCCGTAAGGAGGAGAATGACCCAACACTTGCGATAAACGACAATGATAGCACCAGTCAGATAGTATCTGATGATTTTGATCAACTGAGTCAGCATCAACAGGACACAAAGGATAGCAGCCCAACTcatgaaataaacaataatcaaaTGATAGGTGAAAATATCATGATGGAGAGTTCAAAATGCTCTGTCTGTAAAAATAGACGTCCAAATCTTGGATGGCAAAAggaattttcttataaagaaCTCAAAGCAGCCACAGATGGATTTTCAATCGAGAACTCTCTATCTGAAGGTGGATATGGACCTACCTTCGAAGGTCATTTAGAGGCGGAGGTGAAAATAGTAGTTAAGCAACATCAAATCGCAGACCCTCAGGTGGAGAAAAATATCCTCAAAGCTAGACACAAGAATGTTGCCATGCTGTTGGGTTTATGCAGAGAAGAAAGTCACAATCTCATTGTATACGAATATGCATGCAATGGTTCACTGGACAAGTATCTGTCAAATGAAAGTTGCATGTCATTGACCTGGAGACAAAGGGTGAAAATAGCACTGGGTTGTTGCAGAGGTCTAAAGTTCCTACATGAGAATGCAATAATTCATGGAAGTATAAAATCAAGTAACATTCTGCTAACCCACGACTTTGAACCACTGCTTGGTAACATCAGCTtcggaaaagaaaaacatgaatCAAAGAAGTCCTTTGGACATAAGAATTCTGGATACTTAGCACCAGAGTTTCTGGAGAATGGGAAACTAACAACTAAGACAGATGTATACTCCATGGGTGTGGTTCTGTTAGAACTGATATCTGGCCGTAGGGCTACAGACAAAGCACCAGGAGACAAAATTCTTGTTGTATGGGCAAAGCAATATTTTGGAGGAAAGAAATTTCCACCGTTGGTGGATCCCAAAATCAGCAACTCATACATAGAAGAGGAACTTCTTTCATTGGTTCGCGTAACAGAACAATGTCTCAAAAAGAATCCTAAAAACAGGCTAAGCATGAATATGGTTGTCTCTGAATTACAAGGCATATCAGATAATGAAGAGTACTGTGTAATTGAAGAATCTCTTCCAGAATCATCTTCAACAAGTAGTTTCGCAGACATGTCTGGTTCAAAAGTTAATGAGAAAACACTGGAAACGGAGAGCTTAGGCGAAAACATGAAGCAGACAGATTGTCAATCAGAAGCCTCAGGGCAGATTATCAACAATGACCAAATAACAGACCAAACAGATGCTGATCAGCCAAGCCAGGTTGAACATCAGATGCCCAGCAGATCCCATGCAGATGAGGGGACCTCAGGACCAATGGTTCGCAATAATCATACATTCTCATTCTCCATCACCATTACTCAAATGACAGGTGAAATCCAAGAAGATGTACTCTACAAGTACCAAATACGAATGGAGAGCATCTTTCATCAGGATTTACAGGACAGGTATCAAAGTGAAATTGTGGAGAATTCAAAATGTGCAGTGTGCTCTATTTGCAAAGTTAGACGCCCAAATATTGGATCAGAGAAAAACTTCACTTATGAAGAACTCCAAGCTGCCACAGATGGATTTTCAAATGAGAATTCTTTATCTGACGGTGGATATGGACCTGTTTTCAAAGGTCAGCTAGACGGAAAGCTGAAAATAGTAGTTAAGCAACACCAAATCTCAGACCCAcaagtagaaaaaaatatcaagtcAAGAGTACAGTCATTGCTCACAGCTAGGCACAAGAATGTGGTCATGCTGTTGGGTTGTTCTAGGATAGAAAGTCAGCAGCTGATTGTATATGAGACCATATGCAATGGTTCGCTTGCTATGTACCTATCAAAGGAAAGTTGCAAAGCATTAACCTGGAGTCAAAGGGTGAAAGTGGCTGTGGGTTGCTGCCAAGGTCTAAAGTTCCTTCATGAGAACAACATAATTCATGGAAGTATAAAACCAAGTAACATTCTTCTAACCCATGATTTTGAACCACTGCTTGGAAATTTCAGCTTTGCAAAAGCAGGAGATACATTGAAGAAGACCTATAAAGATAAGAATTCTGGATACATGGCACCAGAGCTTTGTAAGAGTGGAAAGTTTTCAAATAAGACAGATGTATACTCCTTTGGTGTGGTTCTGTTAGAGCTGATAACTGGCAAGAGGGTTACAGGCAAGCAATCGGGAAGGAAAAGTCTTGTTGAATGGGCAAAGCCCCTCCTCGGAGGAAATAAGTACACACAGTTGATAGATCCCAAAATCATTAACTCCTATGAAGATGGGCAACTTCTTTTGTTAGTCAAAGTAACAGCGGAATGTCTCAAAAAGAATCCTAAGAAAAGATCAAGCATGAATGTGGTTGTTTCTGAATTACAAGTCATAGCAGATGGCAAAGAGTGCTATGTAATTGAAGATACTCCTCCAGCAAACCCATATTCAACATGCAGTGTGCAGGGCATTAATGGTTCCCAAGATCAAACCAAAATTGATCAGCTGAGACGAGATGAAGAACCGACACAAAGCAGAGAGCATGAGGAGGAGTGGATCCAACAACCAGTGATTAGCACTAACCACATGATAGATCAAACCACAGCTGCTCAGCTGAGCGAGGATGAAGAGCAGATGCAGAGAAGACCCCTTGGAGAGGAGAGAAGCCTAAGAGAGACAGTAAGCAATGTCTCTGACATAACTAGTTCACAGGGTGACGAGGAATCACACAATGTTTCTGATGTAAGTAGGTCACAGGGTGATGAGTTATCACTTTATGTTTCTGAAGAAACTAGTTCACAAGCTGACGATGACTCACTAGCTCAAGAAGACTTAAGTACAAAGGTTAgtcaagaaaaagagaaattcatTTCTTGTGGCAGAAGTAACAAGGAAACAGAGAATAGACAAGAAAGCAAGAACTCCGCAATCTGTGATGCTGGTGCTACCAGAATACAAGAAGATAGCTTAAGCAGCAGCATGTCTCAGAAAAGTGAAAGGTTGCCTGCATTTAATGGCCATGATCACTACAAGGAAGTTCCAACCGAAACAAACGTTTGTCGCGACATCAATAATATGACGGTTCATGAACCACCACAAATGCGGCGTAGTAACCACTGCTG 3689 0.3974 MEAESVVVILDAASEVDTTVFIWALNKLPLKPRDKLTLLLVLNQITNPMGYKMFVNQTSMLGANKSIIEEEAAMRMEMYQNHEEIVKIVEMYESKEVEFSIQLIIGPKEDTLETVKELKSTWVIIDRKMKKDGEFFLKNLSCDISRLKRDKKIEHLRVPPESIPQEYNSRETYNDSTHGCGESLDTLPESPMAKKYSSPRKEENDPTLAINDNDSTSQIVSDDFDQLSQHQQDTKDSSPTHEINNNQMIGENIMMESSKCSVCKNRRPNLGWQKEFSYKELKAATDGFSIENSLSEGGYGPTFEGHLEAEVKIVVKQHQIADPQVEKNILKARHKNVAMLLGLCREESHNLIVYEYACNGSLDKYLSNESCMSLTWRQRVKIALGCCRGLKFLHENAIIHGSIKSSNILLTHDFEPLLGNISFGKEKHESKKSFGHKNSGYLAPEFLENGKLTTKTDVYSMGVVLLELISGRRATDKAPGDKILVVWAKQYFGGKKFPPLVDPKISNSYIEEELLSLVRVTEQCLKKNPKNRLSMNMVVSELQGISDNEEYCVIEESLPESSSTSSFADMSGSKVNEKTLETESLGENMKQTDCQSEASGQIINNDQITDQTDADQPSQVEHQMPSRSHADEGTSGPMVRNNHTFSFSITITQMTGEIQEDVLYKYQIRMESIFHQDLQDRYQSEIVENSKCAVCSICKVRRPNIGSEKNFTYEELQAATDGFSNENSLSDGGYGPVFKGQLDGKLKIVVKQHQISDPQVEKNIKSRVQSLLTARHKNVVMLLGCSRIESQQLIVYETICNGSLAMYLSKESCKALTWSQRVKVAVGCCQGLKFLHENNIIHGSIKPSNILLTHDFEPLLGNFSFAKAGDTLKKTYKDKNSGYMAPELCKSGKFSNKTDVYSFGVVLLELITGKRVTGKQSGRKSLVEWAKPLLGGNKYTQLIDPKIINSYEDGQLLLLVKVTAECLKKNPKKRSSMNVVVSELQVIADGKECYVIEDTPPANPYSTCSVQGINGSQDQTKIDQLRRDEEPTQSREHEEEWIQQPVISTNHMIDQTTAAQLSEDEEQMQRRPLGEERSLRETVSNVSDITSSQGDEESHNVSDVSRSQGDELSLYVSEETSSQADDDSLAQEDLSTKVSQEKEKFISCGRSNKETENRQESKNSAICDAGATRIQEDSLSSSMSQKSERLPAFNGHDHYKEVPTETNVCRDINNMTVHEPPQMRRSNHC 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02967 1229 Pfam Protein tyrosine and serine/threonine kinase 726 984 IPR001245 GO:0004672|GO:0006468
Bva12g02967 1229 Pfam Protein tyrosine and serine/threonine kinase 290 542 IPR001245 GO:0004672|GO:0006468
Bva12g02967 1229 SUPERFAMILY Protein kinase-like (PK-like) 706 985 IPR011009 -
Bva12g02967 1229 PANTHER OS01G0253100 PROTEIN 683 1090 IPR045271 GO:0004714|GO:0006468
Bva12g02967 1229 PANTHER OS01G0253100 PROTEIN 219 562 IPR045271 GO:0004714|GO:0006468
Bva12g02967 1229 PANTHER OS01G0253100 PROTEIN 82 174 IPR045271 GO:0004714|GO:0006468
Bva12g02967 1229 MobiDBLite consensus disorder prediction 226 245 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1083 1098 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 158 215 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 562 594 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1021 1041 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 612 640 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 562 579 - -
Bva12g02967 1229 Gene3D Transferase(Phosphotransferase) domain 1 799 999 - -
Bva12g02967 1229 Gene3D Transferase(Phosphotransferase) domain 1 358 562 - -
Bva12g02967 1229 SUPERFAMILY Protein kinase-like (PK-like) 271 550 IPR011009 -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1105 1129 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 165 183 - -
Bva12g02967 1229 ProSiteProfiles Protein kinase domain profile. 723 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1005 1041 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1059 1140 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1064 1082 - -
Bva12g02967 1229 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 683 1090 - -
Bva12g02967 1229 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 219 562 - -
Bva12g02967 1229 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 82 174 - -
Bva12g02967 1229 Gene3D Phosphorylase Kinase; domain 1 697 797 - -
Bva12g02967 1229 Gene3D Phosphorylase Kinase; domain 1 259 356 - -
Bva12g02967 1229 MobiDBLite consensus disorder prediction 1005 1020 - -
Bva12g02967 1229 ProSiteProfiles Protein kinase domain profile. 288 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02967 Bva-Chr12 21223069 21232974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02967 711 987 Trihelix Transcription Factor Family AT5G38560 39.175 1.22e-58 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bva12g02967 PK_Tyr_Ser-Thr 5.1e-36 CL0016