Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02959 ATGAGGAAGAAGCTTGATACTCGTTTTCCAGCGGCTCGGATCAAGAAAATCATGCAAACTGATGAGGATGTTGGGAAGATTGCGATGGCTGTGCCTCTTCTAGTTTCTAAAGCGCTAGAACTTTTTTTGCAAGATCTATGTGATCGTACATATGAGATAACACTGAGGAGGGGAGCAAAGACCAtgaattcttttcatttAAAGCAGTGTGTACAGACTTTTAATGTCTTTGATTTTCTGAGAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCTCAGTTGCTACTGGTGATGATCGTGTTGTAACTAAGAGAAGGAAAGTTGTTGGAGAAGAAGGCAATGACGGAGATGATGAGTTGAAGAGAAATAAGATGCAAGAGCTAGGACACACAAATGGCAGAGGAAGAGGTAGGGGCAGGGGTAGAGGTCGTGGGCGAGGGAGCAGAACAGTTGATAGGGAGATGACTGCACACCATGTCAAGTTTGAAGATGATTTAGAtgcatcaaaacaaaatggcAATCACAATCAAAGTCTGGATAATGGCACAGAACCTGAAGATGTGAAGCATAGTGTTCGAGATAGCAAAATGGCAGAAGGGTCCGTGCGAAATTTTGACTTGAATTTGGATCTGGATGAAAATGGGGATTCAATGGTTGTATCAACTCCTGCCCCAGATAGTTCACCCGTGAAATTGAACACAGAACTGAAGCATGAGGAATTCCCTGGCTGGTCCTTGTCTGATTTGGAAAAAATGGCCATTGATCCTATGCAACTTGCCAACTTAAATACAGGGATTGATGAAGATGAGGAGGAAGATTATGATGAAGAATGCTA 836 0.4127 MRKKLDTRFPAARIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLRDIVSKVPDLGGSVATGDDRVVTKRRKVVGEEGNDGDDELKRNKMQELGHTNGRGRGRGRGRGRGRGSRTVDREMTAHHVKFEDDLDASKQNGNHNQSLDNGTEPEDVKHSVRDSKMAEGSVRNFDLNLDLDENGDSMVVSTPAPDSSPVKLNTELKHEEFPGWSLSDLEKMAIDPMQLANLNTGIDEDEEEDYDEEC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02959 278 MobiDBLite consensus disorder prediction 145 170 - -
Bva12g02959 278 MobiDBLite consensus disorder prediction 182 200 - -
Bva12g02959 278 PANTHER HISTONE SUPERFAMILY PROTEIN 1 277 - -
Bva12g02959 278 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 277 - -
Bva12g02959 278 MobiDBLite consensus disorder prediction 105 134 - -
Bva12g02959 278 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bva12g02959 278 SUPERFAMILY Histone-fold 18 88 IPR009072 GO:0046982
Bva12g02959 278 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Bva12g02959 278 MobiDBLite consensus disorder prediction 105 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02959 Bva-Chr12 21160056 21163080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02959 1 266 CCAAT-HAP5 Transcription Factor Family AT3G12480 45.548 3.41e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva12g02959 CBFD_NFYB_HMF 3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02959 K21752 - gmx:100814800 360.533