Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02951 ATGACTTCCAGAGCGGGTGTTCCACAGGAACTTCCCAGAGgTGAAAATAAGCAAAAGAACGTGGTAGCAGAAGGAAGGAACAGACGGGTGCTCCGGGATATTGGTAATCTTGTAGTTAAACAAGCGGAGAAGCCCCACGCTGACCCATTGAAGCGCATCACAAGGTTGGATAATGCTCAAGTCGCAGCAGAGAAGAACAagAAAACAACAACCGAACTTGGGAATTTGGTTGTTTCAACAAAGGTGGTAGCAGCTGAGAAGGTTGTTGCAGAGAAGCCACCAGAACATGAAATTATCATCGTTAGCTCTGACGACGAATctgaagaggaaaagaaggagaaggaacATGTTTCGGGAAGAAAGGCAATAGAAAGGTCATCAAGGAAAAATGTGAAGACCCTCAGTTCAATTCTCACTGCTAGAAGCAAGGTTGCTTGTGGGCTCACAAACAAGCCAAGGGATCTTGTAGTAGACATTGATGCAGCTGACATTGACAATGAACTGGCTGCAGTTGAATATATTGATGACATCTATAAGTTCTACAAGCTGACAGAGGATGAGAATCGTTTACATGATTACATGGGTTCGCAACCAGACATAAATGCCAAGATGAGGTCAATTCTTGTGGACTGGTTGATAGAAGTGCATCGCAAGTTTGAGCTCATGCCAGAAACTCTTTATCTGACAATGAATATCGTGGATCGATTCCTTTCCATGAGGTTTGTACCTCGGAAGGAACTTCAGCTTGTTGGCATCAGCTCAATGCTAATAGCATGCAAATATGAAGAGATATGGGCACCAGAGGTTCATGACTTTGTCTGCATATCAGACAATACCTATACTAGAGAACAGATTTTGATGATGGAGAAGACAATCCTGCGGAAGCTTGATTGGTATTTAACAGTTCCAACACCATATGTCTTCCTTTCTCGGTACATCAAAGCCTCTACACCCTCTGATAAGCAGATGGAGAATACTGTGTTTTTCCTTGCTGAGCTCAGTCTGATGCACTATCCTGCTATCATTCTGTACTGCCCATCTCTGATTGCTGCTTCTGCTGTATATGCGGCACGTTATACACTTGGGCGAAGTCCTTTCTGGACAGAGACTTTAAGGCACTATACAGGCTATTCTGAGGATCAGCTTAGggAATGCGCCGCGCTCATGGCCAGTCTTCATTCTGCAGCTCCAGAAAGCAAGCTGAGGGCAGTTTACAAGAAATTCTGCAGCACAGATCGTGGTGCTGTAGCCCTTCTTGGTGCAGCAACATATGCAAAGAAGTAtaaggatttctttta 1298 0.4284 MTSRAGVPQELPRGENKQKNVVAEGRNRRVLRDIGNLVVKQAEKPHADPLKRITRLDNAQVAAEKNKKTTTELGNLVVSTKVVAAEKVVAEKPPEHEIIIVSSDDESEEEKKEKEHVSGRKAIERSSRKNVKTLSSILTARSKVACGLTNKPRDLVVDIDAADIDNELAAVEYIDDIYKFYKLTEDENRLHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTMNIVDRFLSMRFVPRKELQLVGISSMLIACKYEEIWAPEVHDFVCISDNTYTREQILMMEKTILRKLDWYLTVPTPYVFLSRYIKASTPSDKQMENTVFFLAELSLMHYPAIILYCPSLIAASAVYAARYTLGRSPFWTETLRHYTGYSEDQLRECAALMASLHSAAPESKLRAVYKKFCSTDRGAVALLGAATYAKKYKDFF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02951 432 PANTHER CYCLIN-B1-4 20 422 - -
Bva12g02951 432 Gene3D - 190 301 - -
Bva12g02951 432 SUPERFAMILY Cyclin-like 165 300 IPR036915 -
Bva12g02951 432 CDD CYCLIN 204 293 IPR013763 -
Bva12g02951 432 Pfam Cyclin, C-terminal domain 303 418 IPR004367 -
Bva12g02951 432 PIRSF Cyclin_A_B_D_E 2 431 IPR039361 -
Bva12g02951 432 SMART Cyclin_C_2 303 422 IPR004367 -
Bva12g02951 432 MobiDBLite consensus disorder prediction 1 24 - -
Bva12g02951 432 SUPERFAMILY Cyclin-like 304 422 IPR036915 -
Bva12g02951 432 CDD CYCLIN 301 389 IPR013763 -
Bva12g02951 432 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Bva12g02951 432 SMART cyclin_7 210 294 IPR013763 -
Bva12g02951 432 SMART cyclin_7 307 391 IPR013763 -
Bva12g02951 432 Gene3D - 176 417 - -
Bva12g02951 432 PANTHER CYCLINS 20 422 IPR039361 -
Bva12g02951 432 Pfam Cyclin, N-terminal domain 176 300 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02951 Bva-Chr12 21125926 21128449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02951 45 419 Core Cell Cycle Gene Families AT2G26760 54.211 3.47e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02951 K21777 - gmx:547782 538.11