Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02943 ATGGAACAGAGAAAGTGTTATTCAGAGCTTCTGTTTCcatgtcttcttcttctctgtttcACAGGATCTGCCAAAGCCTACAAAAATTACACAGTGGGAGATTCTTTGGGTTGGTATGACAATACTGAGAAACCCACTGTGAATTACCAGAAATGGGCTTCAGGAAAAGTTTTCAGCTTGGGTGACTTCCTCATTTTCAACACAAACACCAATCACTCTGTTGTCCAAACATACAATGCAACCACATACGAACTATGTGATTACGATGATGCACTCGACAATGACACAACCCAGTGGTCGACTTCAAATCCTTCCAACACCGACACACAGCCGGTGACGGTGGCCGTTCCTCTGATGAAGGAAGGGGCAACTTACTTCTTCTCCGGTGACTACGACGGAGATCAATGTAAGAGCGGACTACATTTTCAAATCAATGTCACTCACGGCCAAGGATTGCCAAAAAGTCTGCAGTCCCCGGAGGAGGAGTCTCCGTCCCCTGCAAGCCCGGTCGCCGGCGATGACGATTCCGCGCCGGATACCATTATTCCTTCTAATTTCAATAAGCCTAAAGAAGAAGGCGATGACATGAAAACAGATGATGGTGATAGTCATAAATCTGGATCTGTTTCAATGTCAATGCATGTGACACTTCACAGGAACTTGTATGgctgttttgttttgttagggcttgtgtttttgttttg 704 0.419 MEQRKCYSELLFPCLLLLCFTGSAKAYKNYTVGDSLGWYDNTEKPTVNYQKWASGKVFSLGDFLIFNTNTNHSVVQTYNATTYELCDYDDALDNDTTQWSTSNPSNTDTQPVTVAVPLMKEGATYFFSGDYDGDQCKSGLHFQINVTHGQGLPKSLQSPEEESPSPASPVAGDDDSAPDTIIPSNFNKPKEEGDDMKTDDGDSHKSGSVSMSMHVTLHRNLYGCFVLLGLVFLF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02943 234 CDD Phytocyanin 28 146 - -
Bva12g02943 234 ProSiteProfiles Phytocyanin domain profile. 28 148 IPR003245 GO:0009055
Bva12g02943 234 PANTHER BNAA08G26900D PROTEIN 15 203 - -
Bva12g02943 234 SUPERFAMILY Cupredoxins 28 146 IPR008972 -
Bva12g02943 234 MobiDBLite consensus disorder prediction 150 207 - -
Bva12g02943 234 Gene3D - 26 149 IPR008972 -
Bva12g02943 234 PANTHER BLUE COPPER PROTEIN 15 203 IPR039391 GO:0009055
Bva12g02943 234 Pfam Plastocyanin-like domain 38 139 IPR003245 GO:0009055
Bva12g02943 234 MobiDBLite consensus disorder prediction 150 164 - -
Bva12g02943 234 MobiDBLite consensus disorder prediction 188 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02943 Bva-Chr12 21095184 21097083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02943 6 234 Phytocyanin Superfamily AT1G08500 54.783 1.27e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02943 - - ccaj:109789262 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02943 12 21095184 21097083 Bva12g02943 12 21095184 21097083 ECH