Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02938 ATGGGCATGATTTGGTGGAGATGGTGCTGTGTTTTGCTCATTTTGTTGCTTGAGATTTCCAGTACGTCTTCACGTTCCATCGTCAAAAACCTCCCAGGTTTTGGTGATCTCCCTTTCAACTTGGAAACAGGATATACAGGAGTGGGAGACAAAGAAGAGGTGAatctattctattattttgttgaatccCAAAGGAGTCCCACCACAGATCCACTCTTACTTTGGCTAATTGGAGGTCCAGCTTGCTCTGCTCTTTCTGCCTTCTTCTATGAAAATGgACCTTTGGTGTTCAACTATGCCAATTTCACTGGGAGCCTTCCAGAACTTCAATTGAATCCAAACAGTTGGACCAAGTTCCTCAACATAATATACGTTGACTCACCAGTTGGCACTGGATTTTCGTACTCAACAACCCAACAAGGCTATTATACCAATGACTCCAAGTCCATAGAAAACCTCTACGACTTTCTACAAAAGTGGCTTGTGGACCACCCTGAATTTGGGTCAAATCCTCTTTACATTGGCGGCGGTTCATATGCAGGGATGGTTGTTCCTCCCCTCGTTCAAAACGTATATCAAGGTTCTCAAGCAGGAATCATGCCACTCATGAACATCCAAGGTTATGTACTTGCAAGTCCAGCAATCGattattttttgatcaatAATTCGAGAGTTGAATTTGCCTACCGAGCATCACTTATATCGGACAAGCTCTACGAGTCTATTAAAGCTAGCTGCAATGGTGATTACGTGAACATTGATcccaacaataaaaaatgtgtatcAGATTATGAAGCCTACTCTAAGTTAGTGAGtgaaatcaatatttataatatttatcaacCAAATTGTGTTCTTTATAATGAGAATCAGAGAATTCTCTTTGAAGACTCTCATCAAATCATCGCAGCATCCACATTTTGGTGTCGAgaTTACCTTTATGTGCTTTGCGAGGTTTGGGCAAATGATCATAATGTTCGAAAGGCTCTCCATGTTAGAGAGGGAACTAAAGGGCAATTCACAAGATGCAATAGGACTGGTTTGGCATACACAGCGGATATCAGCAGTGTTACTCAGCATCATCAGAGTCTCACTAACACAAACCTTCGATCTCTTATTTTCTGtGGCGATGTTGACTTGGCAGCACCACATACTGGTACACAATCTTGGATTCAAACGTCACTTAATAATTTGCACGTGTATAATACTTGGCGACCTTGGTATGTTGATCGTCAAGTAGCTGGATATACAGAAACATACGGAAATAATGAGTTTAATCTTACTTATGCAACTGTCAAGGCAaGGAGCGGGTCATGTGGCGCAAGAGCACAAGCCTA 1337 0.3964 MGMIWWRWCCVLLILLLEISSTSSRSIVKNLPGFGDLPFNLETGYTGVGDKEEVNLFYYFVESQRSPTTDPLLLWLIGGPACSALSAFFYENGPLVFNYANFTGSLPELQLNPNSWTKFLNIIYVDSPVGTGFSYSTTQQGYYTNDSKSIENLYDFLQKWLVDHPEFGSNPLYIGGGSYAGMVVPPLVQNVYQGSQAGIMPLMNIQGYVLASPAIDYFLINNSRVEFAYRASLISDKLYESIKASCNGDYVNIDPNNKKCVSDYEAYSKLVSEINIYNIYQPNCVLYNENQRILFEDSHQIIAASTFWCRDYLYVLCEVWANDHNVRKALHVREGTKGQFTRCNRTGLAYTADISSVTQHHQSLTNTNLRSLIFCGDVDLAAPHTGTQSWIQTSLNNLHVYNTWRPWYVDRQVAGYTETYGNNEFNLTYATVKARSGSCGARAQA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02938 445 Pfam Serine carboxypeptidase 36 433 IPR001563 GO:0004185|GO:0006508
Bva12g02938 445 Gene3D alpha/beta hydrolase 23 286 IPR029058 -
Bva12g02938 445 SUPERFAMILY alpha/beta-Hydrolases 28 433 IPR029058 -
Bva12g02938 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Bva12g02938 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Bva12g02938 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Bva12g02938 445 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 434 IPR001563 GO:0004185|GO:0006508
Bva12g02938 445 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 11 434 - -
Bva12g02938 445 Gene3D - 310 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02938 Bva-Chr12 21047158 21050961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02938 316 434 Calmodulin-binding Proteins AT2G22960 40.336 9.53e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02938 K16296 - gmx:100791997 525.783