Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02915 ATGGAGGACTTGGCCAGCACCGTTGTTGTCAGGATTGCAGAACTCCTACTCTTTAAGCCAACTTTCCGCCATGCCCGTTACCTGTTATGTCTTGGCAAATTCGTCAAAGGTTTTaagaaccaaaaaagagaGCTAGAATCAAAGCAAGAGAGTGTGAAGGAACGCGTCAGGAGAGCCATCAATAGACTCGAAGAACCCGAGGAAATTGTCAAGAATTGGCAGCAAAATGTAGACAATGTCTTGAAAGAGGCTCAGGAGctggaaaggaaaattgaagcAAGAAGCAAATGTAAAACAACCTTGGCCAAGGAGCTGGGTAAGAGAGCTGAGGAACTAGGACTCTTTGATAAGGTTGTCATTGCGGCTATCTCTCATACCCCAAATGCCAGAAAGATTCAAGATCACATCCTTGATGTATTGGGTTTGAGAGTGGAGGAACAATCAGAATTTGCCAGAGCACAAAGGTTGCCAGAGAGGTTAAGGAAGGGGAAGACCCTTGTAATCTTGGATGATGTCTCGGGAAAGCTCGATTTTGAAGCTATAGGAATTCCATGGAATCATGAGAATGGAGCTTGTAGCATTCTGATAACTACTCGAAGACTGGAAGTATGCAGTTCCATGCATTGCCGCCCTGCAATTGAGCTTCTTCTGTTAACCAAGGAAGAATCTTGGACTTGGTTCAGACAGTGTGCAGACATTAAGGATGATTCCCCGCGTGCCTTGAGCGAGGTGGCGAGGAAAATATGTGACAAATGCCAAGGATTGCCCATTGCAATTCTGACGGTAGGAAGCACATTAAGGGGAAAAGCTCAAGAGGTGTGGGAGCATGCAATGTCAAAGCTAGGAAAATTGGATGTTGGAAAGGGTTTGAGAAGCACTTA 881 0.4359 MEDLASTVVVRIAELLLFKPTFRHARYLLCLGKFVKGFKNQKRELESKQESVKERVRRAINRLEEPEEIVKNWQQNVDNVLKEAQELERKIEARSKCKTTLAKELGKRAEELGLFDKVVIAAISHTPNARKIQDHILDVLGLRVEEQSEFARAQRLPERLRKGKTLVILDDVSGKLDFEAIGIPWNHENGACSILITTRRLEVCSSMHCRPAIELLLLTKEESWTWFRQCADIKDDSPRALSEVARKICDKCQGLPIAILTVGSTLRGKAQEVWEHAMSKLGKLDVGKGLRST 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02915 293 Pfam NB-ARC domain 98 284 IPR002182 GO:0043531
Bva12g02915 293 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 5 97 - -
Bva12g02915 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 283 IPR027417 -
Bva12g02915 293 Coils Coil 70 90 - -
Bva12g02915 293 Gene3D - 217 290 IPR042197 -
Bva12g02915 293 PRINTS Disease resistance protein signature 252 266 - -
Bva12g02915 293 PRINTS Disease resistance protein signature 159 173 - -
Bva12g02915 293 PANTHER - 5 97 - -
Bva12g02915 293 PANTHER - 98 274 - -
Bva12g02915 293 Coils Coil 35 62 - -
Bva12g02915 293 Gene3D - 97 213 IPR027417 -
Bva12g02915 293 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 98 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02915 Bva-Chr12 20949623 20950750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02915 156 269 WRKY Transcription Factor Family AT5G45050 31.034 1.86e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02915 - - gsj:114383396 229.95