Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02903 ATGGCGAATCAGGGCTGCAACATCTCCCTCTCCCAGCTCTCTCCTGCTTCCAGCTATGAATCCTCCGACGAAAGCTCCCGGAGCCTGGCCACCCTATCCGGCAGCGTCATTGGTGGATCCTCCTGTAGTCCCAAGCAGGAGAAATCTCGACCCACGGCCGGCTACTCCCTCTTTGGCGGGGCCAACGAGCACCAGATTATCCCTAGCTCGAAGAAACCCAGAGGGAGGCCACCTGGTTCAAAGAACAAGCCAAAGCCACCCCTTGTCATAACTAAGGAAGACGAGCATGCCCTGAAACCCGCCATCATCGATGTCCCCGCCGGCTCCGACGTGGTGGAGACGATTGTCCGGTTCGCCCTCCACCGCAACGTGAGCGTGACGGTTCTGAGTGGGACAGGGGTGCTGTCGAACGTTAGACTCCGACACCCCGTGTCCCCTAACCGTTATCTGAGCTACACGGGACAGTATCCTATGTTGTCCCTTTATGGCTCTTATATCAATAACTCTCATTCACTGCATTCTCCTTCAAACCCATCTTCTTCTGCCGCTGCTGTCCCTTTGCCACCTCCTTCCTTTGGGGTTTGCCTCTTGGGGCCACAAGGGAATTGCTTTGGTGGGATAGTTTGTGGGGAAGTCATAGCGGCGACTGCGATCATGGTTGTGGTGACAACTTTCAAGAGCCCTGGTGTTGAGAGGGTTTTGATTGATGAAAATGGCGAAGAGGGTAGTCGAGATGTCAACACAGGGGTTGCTGCTGTGAGCAACAATGCAAATGCTGCTGAAGGAGGCGCTGGTTTTGGCCGCAATGTCATGGCTGTTGCTGCATACAATGCTGAGACTGGTGGTGGTGTTGGTACCGGCCCTCTCAATTCTCAAGCTGCTCCTCTTAATCTTTTTCAATGGGGCCAAGCTACTCGCAACCCCCGTTGTTG 932 0.5472 MANQGCNISLSQLSPASSYESSDESSRSLATLSGSVIGGSSCSPKQEKSRPTAGYSLFGGANEHQIIPSSKKPRGRPPGSKNKPKPPLVITKEDEHALKPAIIDVPAGSDVVETIVRFALHRNVSVTVLSGTGVLSNVRLRHPVSPNRYLSYTGQYPMLSLYGSYINNSHSLHSPSNPSSSAAAVPLPPPSFGVCLLGPQGNCFGGIVCGEVIAATAIMVVVTTFKSPGVERVLIDENGEEGSRDVNTGVAAVSNNANAAEGGAGFGRNVMAVAAYNAETGGGVGTGPLNSQAAPLNLFQWGQATRNPRC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02903 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 238 - -
Bva12g02903 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 305 IPR014476 GO:0003680
Bva12g02903 310 CDD DUF296 102 225 IPR005175 -
Bva12g02903 310 MobiDBLite consensus disorder prediction 1 90 - -
Bva12g02903 310 Gene3D - 99 249 - -
Bva12g02903 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 305 - -
Bva12g02903 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 226 IPR005175 -
Bva12g02903 310 MobiDBLite consensus disorder prediction 1 50 - -
Bva12g02903 310 ProSiteProfiles PPC domain profile profile. 95 247 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02903 Bva-Chr12 20898445 20899377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02903 71 282 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.616 3.23e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02903 - - zju:107410711 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02903 12 20898445 20899377 Bva12g02903 12 20898445 20899377 ECH