Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02901 ATGACTTCAGTTGTGAAGATTGATAATCAGCACCTTGTTGACAATCTTCAGGGTCTCTCACTCAAAGATCAAAATCAGAGTGAAATGCGGAGTGAAGCAGAGGTTCACGGGGTGGGATTTGGGAACCATGGGGGGATCTGTGCGATATGCTTGGATAAGATAGTGCTCCAGGAAACCGCTCTCGTTAAAGGTTGCGAGCATGCCTACTGCGTAACATGCATCCTTCGCTGGGCCACGTATAGTCCGAAAGTTACTTGCCCTCAGTGTAAACATCCATTCGAGTTCCTCAATGTCCATCGCTCCCTTGATGGCAGCATTCAGGATTATATGTTTGAGGAAAGTGTTTGCCTGCTTCTGAGGGCATCATGGTTCAAACCTCCGACCGTTCAAGATCACGTGGTTCACGAAGATATCTACGAAGAAATTGAGGACTACTACTATGAGTACGAGGATGAGGAAGATGATCTAGACGATGTTTACTATGGTAGTTCGTCAAGTCTTCGCATAGGTAACCGTAGATGGGGAGACAGTGGTTATGTGAGGGCCGGGCGACAAGAAGCCAGGCCAGTCCATCGACCAAACTCCCAAGATTCGGGCGCAAGCTCTTCATCTCGCGtgccaaagaagaaagaaaaagaggctGCAAAACCTGCAACGGGGCGACGAGCAAAGCGAGCACTGAAACGGGAAGCTGCGGCTGCCAAGCATGAGCAGCATTTGGCAAGGTTGGGTAGGACTTG 740 0.4797 MTSVVKIDNQHLVDNLQGLSLKDQNQSEMRSEAEVHGVGFGNHGGICAICLDKIVLQETALVKGCEHAYCVTCILRWATYSPKVTCPQCKHPFEFLNVHRSLDGSIQDYMFEESVCLLLRASWFKPPTVQDHVVHEDIYEEIEDYYYEYEDEEDDLDDVYYGSSSSLRIGNRRWGDSGYVRAGRQEARPVHRPNSQDSGASSSSRVPKKKEKEAAKPATGRRAKRALKREAAAAKHEQHLARLGRT 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02901 246 ProSitePatterns Zinc finger RING-type signature. 65 74 IPR017907 -
Bva12g02901 246 MobiDBLite consensus disorder prediction 184 246 - -
Bva12g02901 246 Pfam Ring finger domain 47 90 IPR001841 -
Bva12g02901 246 ProSiteProfiles Zinc finger RING-type profile. 47 90 IPR001841 -
Bva12g02901 246 PANTHER - 1 246 - -
Bva12g02901 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 246 - -
Bva12g02901 246 SUPERFAMILY RING/U-box 46 96 - -
Bva12g02901 246 MobiDBLite consensus disorder prediction 204 246 - -
Bva12g02901 246 SMART ring_2 47 89 IPR001841 -
Bva12g02901 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 152 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02901 Bva-Chr12 20886682 20889395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02901 1 245 C3H Transcription Factor Family AT5G19430 58.140 8.81e-84 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02901 12 20886682 20889395 Bva12g02901 12 20886682 20889395 ECH