Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02861 ATGAAGAATTCTCAAAGAACCGGCGGCGTGAGGAAGTACCACAAATCGGAACTTCCACGCCTCCGGTGGACACCGGAACTCCATCGACACTTTGTTGAAGCTGTCAAAAGTCTAGGTGGAAAAAACAAAGCAACTCCAAAGCGTATTTTGCAGATAATGCATGCGAGAGGACTGAGGATCTCTCACATTAAAAGCCATCTTCAGATGTACAGaaatatgaaggaaaatggcATCCGAGTATCAGTTGATCCCGTGCTTGAAGGAACAGCACATCATGCGAATGATCTCAAAAGCTGCTCCATTTGCTCACCCCAAAGATCAGCAAGAACTGAATTATGGGCAACATCAAATTATGACAGGAACATTGccaaagaagaattttatctGCTAGAcaaaaaattagggttttcaCAAACCAGTGAAGAAACTGATTATGATCTAAATCAGGAACCCCAGTCAAGTACATGCTTACTTAGTGACATCTCAAATGAAGAAGACAATGATGGGGAGACCAAATTTCATGAGCTACCTGCACTCTCTTTAAGCACTCCTCTAATTCCTATTATGCCTATGATGCATAGTACTACTCAAGAGACAATGCGTTTTCCTTCACCAACTTCAGCAGATAATCACATTCTGGATTCTAGCGCAATACAATCCTTCGGGAGCACTTACGTAAACTTAGACCTAACCATTTG 698 0.394 MKNSQRTGGVRKYHKSELPRLRWTPELHRHFVEAVKSLGGKNKATPKRILQIMHARGLRISHIKSHLQMYRNMKENGIRVSVDPVLEGTAHHANDLKSCSICSPQRSARTELWATSNYDRNIAKEEFYLLDKKLGFSQTSEETDYDLNQEPQSSTCLLSDISNEEDNDGETKFHELPALSLSTPLIPIMPMMHSTTQETMRFPSPTSADNHILDSSAIQSFGSTYVNLDLTI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02861 232 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 3 155 - -
Bva12g02861 232 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Bva12g02861 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Bva12g02861 232 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Bva12g02861 232 Gene3D - 18 75 - -
Bva12g02861 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 155 IPR044848 GO:0003700
Bva12g02861 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02861 Bva-Chr12 20608928 20612382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02861 3 74 G2-like Transcription Factor Family AT1G14600 63.889 1.02e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva12g02861 Myb_DNA-binding 2.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02861 - - ccaj:109790621 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00915 12 9884620 9884871 Bva12g02861 12 20608928 20612382 BWGD