Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02859 ATgcttacattttttattgcaaGATTAGCTCCATCATCAACCCCATGCTGGAAGACGACCCTTCACCGCAATACTTTcctcaatttcaatttcttctcttcttcgaGATTATCTGATCCGAATTGCCTAAAATTACAGCAACAAacagaagaacaagaaaaaaacgACCCCTTTACCTTATGGTACCTCAGGAATTCATGTGGGTTATCTCCCGAAGTAGCTATTGAAGCATCCAAAAAGGTGCGATTGAAAGACCCAATCAACCCAGATTCCGTGCTTAATCTTCTTCGAAACTACGGATTCTCCGAAACCCACATATCGAAGCTCGTGGGAAGACGCCCCAGAGTGCTTTTAGCAAATCCTGAGACGACCCTTTTGCCCAAGCTTACATTTTTCCGTTCCATAGGGCTTTCATCCACCGACATCCCAGAACTTATCAGTGATGTCCCAAGACTCGTAGAAAGCAGCTTGGAGAAAGCTATAATCCCGCGCTATGAGGTACTCAAGAGTGTGtttgttgatgatgatgagaaaGTACATAGGATCATTAAGGGCTCAAAAAGTTTTGCTTATACGTTGTATGACAGAAATTTTCTCCCCAACATTGAGTTCTTAAGACAAGCTGGAGTGCCTCAATCTTCTGTCTCTTTTTTGATAACGAATTATTCACAGGTAGCTTTTACTAAGCATAAAAAGTTCGTTGAATGTGTCGAGTTGGCTAAGGAAATGGAACTTGACCCTTCGAGAGTGTCATTTGTTCAGATGATTCAGGACCTTGCAAGGATGAGGAAATCAAACTGGGAATCCAAATTGCGTGTCTATGAGAGATGTGGTTGGTCCAGGGATGTCACTATTTTAGCATTCAAAAGGTGTCGAAATTGTTTGTTGTATTCAGAGGAGAAAATCACTAAGACGATGAAGTTTCTTGTTGATGAAATGGGTTGGTCATCAGAAGATATTGCAATAAGCCCAATGATTCTTAGTTACAGCTTGAAGAAGAGGATTATCCCTAGATGTTCAGTGGTGAAAATTTTGAGGATGAAAGGTTTGATCAGGAAGGAACTGACCTTAGTTTCGGTTCTTAGTATTAATGAGAAGAAGTTCTTAAAGAGATATGTGATCCGATTTCAGGAAGATGTTCCTCAGTTGTTGGAAATCTATAAAGGTCAAATCGATCCTCTGTGTGGAATGCGGTCTTA 1199 0.3812 MLTFFIARLAPSSTPCWKTTLHRNTFLNFNFFSSSRLSDPNCLKLQQQTEEQEKNDPFTLWYLRNSCGLSPEVAIEASKKVRLKDPINPDSVLNLLRNYGFSETHISKLVGRRPRVLLANPETTLLPKLTFFRSIGLSSTDIPELISDVPRLVESSLEKAIIPRYEVLKSVFVDDDEKVHRIIKGSKSFAYTLYDRNFLPNIEFLRQAGVPQSSVSFLITNYSQVAFTKHKKFVECVELAKEMELDPSRVSFVQMIQDLARMRKSNWESKLRVYERCGWSRDVTILAFKRCRNCLLYSEEKITKTMKFLVDEMGWSSEDIAISPMILSYSLKKRIIPRCSVVKILRMKGLIRKELTLVSVLSINEKKFLKRYVIRFQEDVPQLLEIYKGQIDPLCGMRS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02859 399 Gene3D Transcription termination factor 3, mitochondrial 175 380 IPR038538 -
Bva12g02859 399 PANTHER CGI-12 PROTEIN-RELATED 28 390 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 Pfam mTERF 261 369 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 Pfam mTERF 93 250 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 390 - -
Bva12g02859 399 SMART mt_12 216 246 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Bva12g02859 399 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02859 Bva-Chr12 20598694 20601559 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g02859 mTERF 1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02859 K15032 - qsu:112035834 344.354