Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02848 ATGAATGATATGATTGAGGATGACAGagatcaGCATATCAGAGTAGAGAGAGATTATGAAGAGATGAAAAACATTCGCAAGGGATATATTCCAGTGTTGGTGGGCAGAGGGGATGGTAATATGGAGAAGAACTGGTTGCCCATCAAACTGATTCAGCATCCCACCATTGTTGAGTTACTAGAGAAATCTGCAGATGAGTTTGGATATCATCAGCAAGGCTTGTTGAGAATCTCATCTGATGCAGACACCTTCAAAGGCATTCTTCGTCAAGTATCAAGGAAGCAAGTTGCTAGAATCTTTTTTTA 305 0.3967 MNDMIEDDRDQHIRVERDYEEMKNIRKGYIPVLVGRGDGNMEKNWLPIKLIQHPTIVELLEKSADEFGYHQQGLLRISSDADTFKGILRQVSRKQVARIFF 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02848 101 Pfam Auxin responsive protein 20 89 IPR003676 GO:0009733
Bva12g02848 101 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 16 94 - -
Bva12g02848 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02848 Bva-Chr12 20530821 20532791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02848 18 89 Calmodulin-binding Proteins AT4G31320 30.556 1.16e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02848 - K14488 pvu:PHAVU_008G194200g 99.3673