Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02826 ATGGACGAACCCTTTCTCCCCAATAAAGGAGTAGCAGAATCAGTTTCACCAAGCAGGCCAATATCCAGAATAGAATTCCCTTCTTGCCTTGATCTTGGCCCCTCTCGCCGCCAATCTTCTGCTCGCCTCATCACCAATGAAGAAATCATTCAGATAATCACCACTCCCAGAGCTCCTTCCTACGTGAATCTCATCGCTAACTTGAACCGGAAACGCCAAATTACCCATCGTTCCCACTCTGCTCCTTCGGTTTTTACTGATATCAAGGGTAATGTTCATGACCTGTTTGATACAAGACCCAGCAGAAAAACATCACCTTACATTGTTCAAATTTCCTTCATTGGGTTTATTTTGTATGTGGGCATTGGCTCTTTAGTGTACTTGACTAGTGGGAGCTTCAAAGGCACTACCACATTCAGGCCTGTGGATGCTGTTTACTTCACAGTGGTGACTCTCTGCACAATTGGGTATGGAGATATTGTTCCTGATGCCACATTTACCAAAATGTTCACTTGTGTGTTCATTTTGGTGGGTTTTGGCTTTGTGGGCATTCTGCTAAATGGGTTGGTTGCTTACATTTGTGATAGGCAAGAGGAAATTTTGCTGAGCACAATGGATGAGAATAGGTTTAATACAATGGTTAAGACTTATATGATTgacaaagagaaaggaaggatGAGAATTAGAACCAAAGTGTGTCTTGCTTTGGCTGTTGTCATATGCTGCATTGCTGTGGGGACAATTTCAGTGCACTTTCTTGAGGATTTGGATTGGGTTAATAGCTTATATCTCTCAGTTACTTCTGTCACAACTGTGGGTTATGGGGATTATGCCTTCTCTACTTTGAGGGGAAGATGTTTCGCCATTATATGGTTATTGGTAAGCACATTAGCAGTTGCAAGAGCCTTTCTGTACCTTACTGAGCATAGTGTTGACAAGAGGAATCGAATTATGGCTAAATGGATTCTGCAGAGGAAGATTACATTATCAGATTTAGTGGCTGCAGACCTTGATAATGATGGATCAATCAGTAAGGCTGAATTTGTCATATACAAGCTTAAGGAGATGGGAAAGATAACTGAGATAGATATTCAACAAATAAGCAGACAATTTGATTCCATAGACACTGGCAAATGTGGCAAGCTCACTTTTGCTGACATTGTGGAACTCGTCTA 1175 0.4085 MDEPFLPNKGVAESVSPSRPISRIEFPSCLDLGPSRRQSSARLITNEEIIQIITTPRAPSYVNLIANLNRKRQITHRSHSAPSVFTDIKGNVHDLFDTRPSRKTSPYIVQISFIGFILYVGIGSLVYLTSGSFKGTTTFRPVDAVYFTVVTLCTIGYGDIVPDATFTKMFTCVFILVGFGFVGILLNGLVAYICDRQEEILLSTMDENRFNTMVKTYMIDKEKGRMRIRTKVCLALAVVICCIAVGTISVHFLEDLDWVNSLYLSVTSVTTVGYGDYAFSTLRGRCFAIIWLLVSTLAVARAFLYLTEHSVDKRNRIMAKWILQRKITLSDLVAADLDNDGSISKAEFVIYKLKEMGKITEIDIQQISRQFDSIDTGKCGKLTFADIVELV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02826 391 Gene3D - 94 197 - -
Bva12g02826 391 ProSiteProfiles EF-hand calcium-binding domain profile. 362 391 IPR002048 GO:0005509
Bva12g02826 391 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 54 386 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva12g02826 391 PRINTS Two pore domain K+ channel signature 270 279 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva12g02826 391 PRINTS Two pore domain K+ channel signature 150 178 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva12g02826 391 Gene3D - 333 391 - -
Bva12g02826 391 SUPERFAMILY Voltage-gated potassium channels 99 193 - -
Bva12g02826 391 ProSitePatterns EF-hand calcium-binding domain. 336 348 IPR018247 -
Bva12g02826 391 SUPERFAMILY EF-hand 335 390 IPR011992 -
Bva12g02826 391 Gene3D - 199 332 - -
Bva12g02826 391 Pfam Ion channel 118 192 IPR013099 -
Bva12g02826 391 Pfam Ion channel 239 305 IPR013099 -
Bva12g02826 391 PANTHER OS01G0696100 PROTEIN 54 386 - -
Bva12g02826 391 SUPERFAMILY Voltage-gated potassium channels 220 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02826 Bva-Chr12 20399089 20401794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02826 76 389 Ion Channels AT4G18160 51.111 1.98e-105 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02826 K05389 - pvy:116114463 558.91