Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02823 ATGGACAGAAAGCAAGAACAAGAGGAGGAGAAGCAGAATAGACCTAGCATTGATGTTGATACACTAGCATCATCTAAAATCCCAAAAGCTGTTTCACCAGTTTCTTCTGCACTAAAGGGGGAAACAATCAAACGGCCCCGTGGCCGTCCTGCAGGCTCCAAAAACAAGCCAAAGCCACCGATAATCGTTGCCCGGGACAGTGCCAATTCGCTGCGAGCTCATGCCATGGAGATCAGCTCTGGCTGTGATGTCAATGAGATCTTGTTAAGCTTTGCAAGGAGGAAGCAAAGGGGAGTCTGCATACTTAGTGGTTCTGGGTGTGTGACAAATGTGACACTGCGCCAACCAGCTGCATCATCTGGTGCCATTGTGACCCTTCATGGCAGGTTTGAGATTCTTTCCTTGCTGGGTTCAATCCTGCCTCCACCAGCACCACCTGGGATCACAGGTCTCACCATCTACCTTGCAGGTGCTCAAGGCCAAGTTGTGGGTGGTGGTGTGGTTGGTGCTCTGATTGCTTCAGGCCCTGTTGTGATCATGGCTGCTTCATTCATGAATGCTACTTTTGATCGCCTTCCGTTGGATGACGATGAAGTTGCTGCTGCTATGAACAATCAGCATTACCAAAATGGCCGTAGCCATCATATTGATGTTTCAGATTTATATGGGATGCCACAAAACTTGCTTACGAATGGTGCTATGCCCCCTGAGATATACTCTTGGGCACCAGGGAGGAGCTTGTCAAAAACCTG 752 0.4907 MDRKQEQEEEKQNRPSIDVDTLASSKIPKAVSPVSSALKGETIKRPRGRPAGSKNKPKPPIIVARDSANSLRAHAMEISSGCDVNEILLSFARRKQRGVCILSGSGCVTNVTLRQPAASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGGVVGALIASGPVVIMAASFMNATFDRLPLDDDEVAAAMNNQHYQNGRSHHIDVSDLYGMPQNLLTNGAMPPEIYSWAPGRSLSKT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02823 250 PIRSF ESCAROLA 1 244 IPR014476 GO:0003680
Bva12g02823 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 6 249 - -
Bva12g02823 250 MobiDBLite consensus disorder prediction 1 16 - -
Bva12g02823 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 185 IPR005175 -
Bva12g02823 250 Gene3D - 71 208 - -
Bva12g02823 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 200 - -
Bva12g02823 250 ProSiteProfiles PPC domain profile profile. 68 207 IPR005175 -
Bva12g02823 250 MobiDBLite consensus disorder prediction 1 61 - -
Bva12g02823 250 CDD DUF296 72 155 IPR005175 -
Bva12g02823 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 249 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02823 Bva-Chr12 20384725 20386381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02823 27 249 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 76.786 1.83e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02823 - - qsu:111990161 370.548