Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02817 ATGCAGCAAGATCAGAGAAAAAAGAGTTCAACGGAAATGGAATTTTTCTCAGAATATGGTGATGCCAACCGGtacaaaattcaagaaatagTAGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCAATTGACACTCATACCGGTGAAAAAGTGGcaataaaaaagatacatGACATCTTTGAGCACATATCTGATGCTGCACGAATTCTTCGTGAGATAAAACTTCTCAGACTTCTGCGACATCCTGATATTGTTGAAATTAAACACATTATGCTGCCTCCTTCTAGGAAGGactttaaagatatttatgttgtttttgaGCTTATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAACGATGACTTGACAAAGGAGCACTATCAGTTTTTTCTCTACCAATTACTTCGAGCATTGAAGTATATTCATACTGCAAATGTCTATCACCGAGACTTGAAACCAAAGAATATACTGGCTAATGCAAATTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCATCAACTATATTTTGGACGGATTATGTCGCTACGAGGTGGTATAGAGCCCCAGAGCTTTGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGCATAGGTTGCATTTTTGCTGAGGTATTAACAGGGAAGCCGCTTTTTCCTGGAAAAAATGTTGTTCATCAATTGGATCTGATGACTGATTTGCTTGGTACTCCCTCTCTGGATACCATATCCCggGTACGTAATGATAAGGCAAGGAGGTACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCCATTTGcacaaaaatttccaaatgcAGATCCTTTAGCAATACGACTACTGGAAAGGTTGCTTGCTTTTGATCCAAAAGACCGGCCCACTGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGTCAAAAGTTGAGAGGGAACCCTCCTGCCAGCCTATCACAAAAATggagtttgaatttgaaaggCGAAGAGtcacaaaggaagaaatacgAGAGCTTATCTTCCGCGAGATTCTAGAGTATCATCCTCAGCTATTGAAAGACTACATGAATGGGACAGAGAGAACTAATTTTCTCTATCCAAgTGCTGTCGATCACTTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGCGGTAAAAATGGGCCAGTTATACCTCTTGATAGAAAGCACGTCTCTCTTCCAAGGTCGACTGTTGTACATTCAAATATGGTACCCCCAAAGGAgcaatcaaatattatttccaGTAAAAGCCGGCCGAAAGCTGAGGAATATAACAAGAGTTCCAGAGATACTGAAATTTCTGTGCCAAGGACCATGCAGGGACCCCCAATGATTCCATTAGCAAAACCTGGAAAAATTGTAGGGCCAGTTGTTCCATATGAGTATGGAACTGTTGTCAAGGATTCTTATGATCCAAGGACGATCATCAGGGGTAGCGTTCTTCCTCCTCAAGCTGTTCCCCCTTCATATTATTACCAAAGATCTAGCTCAGGGAATCAAGAAAGGTCAGCAACAGAAGCAGATAAGAGTTTGCCTTTGCAAGCCAACAAAGCCCAGCAATGTGGAGTCAATGCCAAAGTAGCACCAGATATAGCCATTAATATCGATACAAACCCGTTTTTTATGACGCGGGCTGGAGTGAACAAGATCGAACAAGATGATCAAATAGCTATCAACACGAACCTGCTGCAGACGAAGGCTCAATATGCCGGGATCAGTGCTGCTGCCGGAGCCACTGCACATAGAAAGGCAGGGCCGGTTCAGTATGGTTTGACAAGGATGTTCTA 1844 0.3959 MQQDQRKKSSTEMEFFSEYGDANRYKIQEIVGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPSTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLAIRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDHFRKQFAHLEENGGKNGPVIPLDRKHVSLPRSTVVHSNMVPPKEQSNIISSKSRPKAEEYNKSSRDTEISVPRTMQGPPMIPLAKPGKIVGPVVPYEYGTVVKDSYDPRTIIRGSVLPPQAVPPSYYYQRSSSGNQERSATEADKSLPLQANKAQQCGVNAKVAPDIAINIDTNPFFMTRAGVNKIEQDDQIAINTNLLQTKAQYAGISAAAGATAHRKAGPVQYGLTRMF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02817 614 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Bva12g02817 614 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Bva12g02817 614 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Bva12g02817 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Bva12g02817 614 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bva12g02817 614 MobiDBLite consensus disorder prediction 424 466 - -
Bva12g02817 614 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02817 614 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02817 614 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Bva12g02817 614 MobiDBLite consensus disorder prediction 506 527 - -
Bva12g02817 614 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02817 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Bva12g02817 614 CDD STKc_TDY_MAPK 24 361 - -
Bva12g02817 614 MobiDBLite consensus disorder prediction 508 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02817 Bva-Chr12 20338654 20344780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02817 1 434 MAP Kinase Gene Family AT2G42880 88.018 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bva12g02817 Pkinase 9.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02817 - - gmx:100811788 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00957 12 10145421 10150169 Bva12g02817 12 20338654 20344780 BWGD